RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 OR2L5Q8NG80 312 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 LZICQ8WZA0 190 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 SLC22A18Q96BI1 424 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 BBS4Q96RK4 519 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 MBOAT4Q96T53 435 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 AMBRA1Q9C0C7 1298 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 ADNPQ9H2P0 1102 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 GALNT8Q9NY28 637 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 IFT80Q9P2H3 777 aaPredicted RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 APOBEC3BQ9UH17 382 aaKnown RBP9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 KLF15Q9UIH9 416 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 C3orf18Q9UK00 162 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 SH3GLB1Q9Y371 365 aa9.04□□□□□ -0.96
COL6A4P1-201ENST00000446690 USP34Q70CQ2 3546 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 A0A1W2PR48 441 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 A6NCN8 305 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 C5orf58C9J3I9 102 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 BCHEP06276 602 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 CYP4B1P13584 511 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 DRD2P14416 443 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 EEF1B2P24534 225 aaKnown RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 IGFBP5P24593 272 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 ATP5A1P25705 553 aaKnown RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 CD6P30203 668 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 RRM2P31350 389 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 MAGEA8P43361 318 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 CLCN2P51788 898 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 UBXN2BQ14CS0 331 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZNF630Q2M218 657 aaPredicted RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 RPS26P11Q5JNZ5 115 aaPredicted RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 TTC23Q5W5X9 447 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 ZNF425Q6IV72 752 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 USP51Q70EK9 711 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 CCDC116Q8IYX3 515 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 C8orf59Q8N0T1 100 aaPredicted RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 NATD1Q8N6N6 113 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 OR52J3Q8NH60 311 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 TAMM41Q96BW9 452 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 NMD3Q96D46 503 aaKnown RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 OR2A14Q96R47 310 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 GLIPR2Q9H4G4 154 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 RIBC2Q9H4K1 309 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 TMEM38AQ9H6F2 299 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 NEUROD4Q9HD90 331 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 SLC35C2Q9NQQ7 365 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 KIF17Q9P2E2 1029 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 ANGPT4Q9Y264 503 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 TESMINQ9Y4I5 508 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 SLCO1B1Q9Y6L6 691 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 BRWD1Q9NSI6 2320 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 LOC100130705A0A1B0GUX0 176 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 SMIM31A0A1B0GVY4 71 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 MAN2B1O00754 1011 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 B4GAT1O43505 415 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 PRAMEF10O60809 474 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 EIF2S1P05198 315 aaKnown RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 UGT2B7P16662 529 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 FEN1P39748 380 aaKnown RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 GSTM5P46439 218 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 DAPP51397 102 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 RAD23AP54725 363 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 STXBP1P61764 594 aaKnown RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 TRA2BP62995 288 aaKnown RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 SIM2Q14190 667 aaPredicted RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 KIR2DS3Q14952 304 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 FBXO42Q6P3S6 717 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 SYT13Q7L8C5 426 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 ABI3BPQ7Z7G0 1075 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 CYP4Z1Q86W10 505 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 PAQR7Q86WK9 346 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 ATG16L2Q8NAA4 619 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 SRFBP1Q8NEF9 429 aaKnown RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 TMIGD2Q96BF3 282 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 NEURL3Q96EH8 262 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 OTUB1Q96FW1 271 aaPredicted RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 MSANTD3Q96H12 275 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 C7orf34Q96L11 122 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 GSDMCQ9BYG8 508 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 EPS8L2Q9H6S3 715 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 SIRT3Q9NTG7 399 aaPredicted RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 THUMPD1Q9NXG2 353 aaKnown RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 WSB2Q9NYS7 404 aaPredicted RBP9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 ACTR10Q9NZ32 417 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 USE1Q9NZ43 259 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 CPNE7Q9UBL6 633 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 TRPC4Q9UBN4 977 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 ASB4Q9Y574 426 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 PCDHGA2Q9Y5H1 932 aa9.03□□□□□ -0.96
COL6A4P1-201ENST00000446690 A0A087WXM4 84 aa9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 TMEM229AB2RXF0 380 aa9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 TBX19O60806 448 aa9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 B4GALT2O60909 372 aa9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 GUCY1B2O75343 617 aa9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 IFNA14P01570 189 aa9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 ZNF888P0CJ79 500 aaPredicted RBP9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 ARAFP10398 606 aa9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 PVRP15151 417 aa9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 FPR1P21462 350 aa9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 NTSP30990 170 aa9.02□□□□□ -0.97
COL6A4P1-201ENST00000446690 CCR5P51681 352 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms