RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 CXCL12P48061 93 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 SUOXP51687 545 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 RPS3AP61247 264 aaKnown RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 SNRPD2P62316 118 aaKnown RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 PTSQ03393 145 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 COQ5Q5HYK3 327 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 EIF3MQ7L2H7 374 aaKnown RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 DCP2Q8IU60 420 aaKnown RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 VN1R2Q8NFZ6 395 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 ZNF597Q96LX8 424 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 MACROD1Q9BQ69 325 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 FNDC11Q9BVV2 318 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 MROQ9BYG7 248 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 KCNH6Q9H252 994 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 PRSS16Q9NQE7 514 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 PPIEQ9UNP9 301 aaKnown RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 CORO2BQ9UQ03 480 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 PTPRFP10586 1907 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 SCN4AP35499 1836 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 LOC100130705A0A1B0GUX0 176 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 TAPBPO15533 448 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 MED26O95402 600 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 MRPL28Q13084 256 aaKnown RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 TDGQ13569 410 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 TAB1Q15750 504 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 GKN2Q86XP6 184 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 RASGRP3Q8IV61 690 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 CBARPQ8N350 705 aaPredicted RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 FRS2Q8WU20 508 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 MAL2Q969L2 176 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 ARRDC3Q96B67 414 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 RGMAQ96B86 450 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 KCNC2Q96PR1 638 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 F2RL3Q96RI0 385 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 OR2B2Q9GZK3 357 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 EXO5Q9H790 373 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 KCNK12Q9HB15 430 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 PNO1Q9NRX1 252 aaKnown RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 BTN3A3O00478 584 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 UGT2B11O75310 529 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 WBP4O75554 376 aaKnown RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 GGT1P19440 569 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 P2RY2P41231 377 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 NUDT6P53370 316 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 CBLBQ13191 982 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 AGAP7PQ5VUJ5 663 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 HMBOX1Q6NT76 420 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 CCBE1Q6UXH8 406 aaPredicted RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 AMIGO1Q86WK6 493 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 OR8H1Q8NGG4 311 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 GTF2H4Q92759 462 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 ZBED6CLQ96FA7 236 aaPredicted RBP10.13□□□□□ -0.79
TOP3B-210ENST00000444502 DTD2Q96FN9 168 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 MSANTD3Q96H12 275 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 SLC35C2Q9NQQ7 365 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 EHD3Q9NZN3 535 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 AASSQ9UDR5 926 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 ACSL6Q9UKU0 697 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 SNX7Q9UNH6 387 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 POLR1DQ9Y2S0 133 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 PCDHA9Q9Y5H5 950 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 PLXNA1Q9UIW2 1896 aa10.13□□□□□ -0.79
TOP3B-210ENST00000444502 ARHGEF33A8MVX0 844 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 ATP6V1G2-DDX39BF2Z307 99 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 MITFO75030 526 aaPredicted RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 ARHGEF15O94989 841 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 C1SP09871 688 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 JUPP14923 745 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 SDC1P18827 310 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 RPL4P36578 427 aaKnown RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 PTPN5P54829 565 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 RGS8P57771 180 aaPredicted RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 MTAPQ13126 283 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 EIF4EBP2Q13542 120 aaPredicted RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 ELOCQ15369 112 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 SYT16Q17RD7 645 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 DEFB133Q30KQ1 61 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 SPANXN2Q5MJ10 180 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 DESI1Q6ICB0 168 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 FAM92BQ6ZTR7 304 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 HMGN2P46Q86SG4 172 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 CNIH3Q8TBE1 160 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 ADAMTS16Q8TE57 1224 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 UBE2ZQ9H832 354 aaPredicted RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 ZNF304Q9HCX3 659 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 BRD7Q9NPI1 651 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 KRCC1Q9NPI7 259 aaPredicted RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 AGPAT4Q9NRZ5 378 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 H7C0S8 307 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 PTNP21246 168 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 PTX3P26022 381 aaPredicted RBP10.12□□□□□ -0.79
TOP3B-210ENST00000444502 P2RX3P56373 397 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 PRR5P85299 388 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 CATSPEREQ5SY80 951 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 Q7L0L9 218 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 SLC9B2Q86UD5 537 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 MINDY2Q8NBR6 621 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 HUS1BQ8NHY5 278 aa10.12□□□□□ -0.79
TOP3B-210ENST00000444502 ZNF563Q8TA94 476 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms