RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 ZRSR2Q15696 482 aaKnown RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 KRTCAP3Q53RY4 240 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 TTC19Q6DKK2 380 aaPredicted RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 HSDL2Q6YN16 418 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 GPR180Q86V85 440 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 CYP4Z2PQ8N1L4 340 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 ARMC10Q8N2F6 343 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 L3MBTL4Q8NA19 623 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 MORN4Q8NDC4 146 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 PTPMT1Q8WUK0 201 aaPredicted RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 MAGED4Q96JG8 741 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 CDK15Q96Q40 435 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 MRPL57Q9BQC6 102 aaKnown RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 RPF2Q9H7B2 306 aaKnown RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 TRIM45Q9H8W5 580 aaPredicted RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 SUCOQ9UBS9 1254 aaKnown RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 SH3BGRL2Q9UJC5 107 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 ZNF223Q9UK11 482 aaPredicted RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 NPIPA1Q9UND3 350 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 ERVK-11Q9UQG0 969 aa18.7■□□□□ 0.58
LRCH3-208ENST00000443727 KLF13Q9Y2Y9 288 aaPredicted RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 YARS2Q9Y2Z4 477 aaKnown RBP18.7■□□□□ 0.58
LRCH3-208ENST00000443727 ASPDHA6ND91 283 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 STX16-NPEPL1H3BU86 382 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 PLPP1O14494 284 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 STX16O14662 325 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 ZG16O60844 167 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 RHOXF2BP0C7M4 288 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 ZNF24P17028 368 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 GPR143P51810 404 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 NEK2P51955 445 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 CYP20A1Q6UW02 462 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 TRMT10CQ7L0Y3 403 aaKnown RBP18.69■□□□□ 0.58
LRCH3-208ENST00000443727 OR4N5Q8IXE1 308 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 RELTQ969Z4 430 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 MTFMTQ96DP5 389 aaKnown RBP18.69■□□□□ 0.58
LRCH3-208ENST00000443727 GPR137Q96N19 417 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 DGAT2Q96PD7 388 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 RHOXF2Q9BQY4 288 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 MRPL46Q9H2W6 279 aaKnown RBP18.69■□□□□ 0.58
LRCH3-208ENST00000443727 LIN28AQ9H9Z2 209 aaKnown RBP18.69■□□□□ 0.58
LRCH3-208ENST00000443727 COPS7AQ9UBW8 275 aa18.69■□□□□ 0.58
LRCH3-208ENST00000443727 DIDO1Q9BTC0 2240 aaKnown RBP18.69■□□□□ 0.58
LRCH3-208ENST00000443727 CCL21O00585 134 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 OR7A17O14581 309 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 DYRK3O43781 588 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 SLC19A2O60779 497 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 OR2J2O76002 312 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 ABHD2P08910 425 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 COL8A1P27658 744 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 BUD31P41223 144 aaPredicted RBP18.68■□□□□ 0.58
LRCH3-208ENST00000443727 ARFIP1P53367 373 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 CUL3Q13618 768 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 TEX35Q5T0J7 233 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 ZNF227Q86WZ6 799 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 ZCCHC7Q8N3Z6 543 aaKnown RBP18.68■□□□□ 0.58
LRCH3-208ENST00000443727 CPSF7Q8N684 471 aaKnown RBP18.68■□□□□ 0.58
LRCH3-208ENST00000443727 OR52B6Q8NGF0 335 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 SLC2A12Q8TD20 617 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 ASB15Q8WXK1 588 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 TANKQ92844 425 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 ANKRD9Q96BM1 317 aaPredicted RBP18.68■□□□□ 0.58
LRCH3-208ENST00000443727 RBM18Q96H35 190 aaKnown RBP18.68■□□□□ 0.58
LRCH3-208ENST00000443727 TIMMDC1Q9NPL8 285 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 LYARQ9NX58 379 aaKnown RBP18.68■□□□□ 0.58
LRCH3-208ENST00000443727 PCTPQ9UKL6 214 aa18.68■□□□□ 0.58
LRCH3-208ENST00000443727 A8MVJ9 347 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 KLRC4-KLRK1H3BQV0 150 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 WWP2O00308 870 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 FOXE1O00358 373 aaPredicted RBP18.67■□□□□ 0.58
LRCH3-208ENST00000443727 FGF17O60258 216 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 PRKNO60260 465 aaPredicted RBP18.67■□□□□ 0.58
LRCH3-208ENST00000443727 WISP2O76076 250 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 MEOX1P50221 254 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 TNFRSF17Q02223 184 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 IFT88Q13099 833 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 C16orf47Q6ZP98 133 aaPredicted RBP18.67■□□□□ 0.58
LRCH3-208ENST00000443727 OR5L2Q8NGL0 311 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 WDR20Q8TBZ3 569 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 SERPINI1Q99574 410 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 WDR41Q9HAD4 459 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 SEMA4BQ9NPR2 832 aaPredicted RBP18.67■□□□□ 0.58
LRCH3-208ENST00000443727 HPF1Q9NWY4 346 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 MYOTQ9UBF9 498 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 ATG4BQ9Y4P1 393 aa18.67■□□□□ 0.58
LRCH3-208ENST00000443727 ASNA1O43681 348 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 PEX1O43933 1283 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 EEDO75530 441 aaKnown RBP18.66■□□□□ 0.58
LRCH3-208ENST00000443727 FAM58BPP0C7Q3 252 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 CA7P43166 264 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 STT3AP46977 705 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 HNRNPH2P55795 449 aaKnown RBP18.66■□□□□ 0.58
LRCH3-208ENST00000443727 PLIN5Q00G26 463 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 FOLH1Q04609 750 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 BIKQ13323 160 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 SGO1Q5FBB7 561 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 FRG2Q64ET8 278 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 C18orf63Q68DL7 685 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 MTFR2Q6P444 385 aa18.66■□□□□ 0.58
LRCH3-208ENST00000443727 MILR1Q7Z6M3 343 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms