RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 APCDD1LQ8NCL9 501 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 PARD6BQ9BYG5 372 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 C12orf65Q9H3J6 166 aaKnown RBP22.08■■□□□ 1.13
VARS-217ENST00000440048 CDCP1Q9H5V8 836 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 LYARQ9NX58 379 aaKnown RBP22.08■■□□□ 1.13
VARS-217ENST00000440048 VTI1BQ9UEU0 232 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 SNX6Q9UNH7 406 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 PPIEQ9UNP9 301 aaKnown RBP22.08■■□□□ 1.13
VARS-217ENST00000440048 ASB4Q9Y574 426 aa22.08■■□□□ 1.13
VARS-217ENST00000440048 SPTAN1Q13813 2472 aaKnown RBP22.07■■□□□ 1.12
VARS-217ENST00000440048 COPEO14579 308 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 PROM1O43490 865 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 PLIN3O60664 434 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 MLYCDO95822 493 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 PDYNP01213 254 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 IFNA16P05015 189 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 FAM58BPP0C7Q3 252 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 ST13P50502 369 aaKnown RBP22.07■■□□□ 1.12
VARS-217ENST00000440048 GPR143P51810 404 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 SERTAD2Q14140 314 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 RPUSD3Q6P087 351 aaKnown RBP22.07■■□□□ 1.12
VARS-217ENST00000440048 CYP20A1Q6UW02 462 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 GPRIN3Q6ZVF9 776 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 RPS19BP1Q86WX3 136 aaKnown RBP22.07■■□□□ 1.12
VARS-217ENST00000440048 NUDT13Q86X67 352 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 LGI4Q8N135 537 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 TMEM132CQ8N3T6 1108 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 RIBC1Q8N443 379 aaPredicted RBP22.07■■□□□ 1.12
VARS-217ENST00000440048 CDYL2Q8N8U2 506 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 SELENOMQ8WWX9 145 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 CCDC126Q96EE4 140 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 BARD1Q99728 777 aaKnown RBP22.07■■□□□ 1.12
VARS-217ENST00000440048 RPF2Q9H7B2 306 aaKnown RBP22.07■■□□□ 1.12
VARS-217ENST00000440048 ABI3Q9P2A4 366 aa22.07■■□□□ 1.12
VARS-217ENST00000440048 USP9YO00507 2555 aaPredicted RBP22.07■■□□□ 1.12
VARS-217ENST00000440048 TRBV11-1A0A0K0K1C0 115 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 FGF17O60258 216 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 PRKRAO75569 313 aaKnown RBP22.06■■□□□ 1.12
VARS-217ENST00000440048 GBAP04062 536 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 GNLYP22749 145 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 TLX1P31314 330 aaPredicted RBP22.06■■□□□ 1.12
VARS-217ENST00000440048 UQCRFS1P47985 274 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 IFFO1Q0D2I5 559 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 LCP2Q13094 533 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 TUBA3CQ13748 450 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 TUBA3EQ6PEY2 450 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 OR4N5Q8IXE1 308 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 CCNYL1Q8N7R7 359 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 NCLNQ969V3 563 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 VMP1Q96GC9 406 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 MRPL1Q9BYD6 325 aaKnown RBP22.06■■□□□ 1.12
VARS-217ENST00000440048 DEFB126Q9BYW3 111 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 SLC29A3Q9BZD2 475 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 GSTO2Q9H4Y5 243 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 ZNF223Q9UK11 482 aaPredicted RBP22.06■■□□□ 1.12
VARS-217ENST00000440048 SLC12A4Q9UP95 1085 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 STK38LQ9Y2H1 464 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 CLCA3PQ9Y6N3 262 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 SVILO95425 2214 aa22.06■■□□□ 1.12
VARS-217ENST00000440048 A0A1W2PR48 441 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 GABRR3A8MPY1 467 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 TCP11X1B4DZS4 312 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 MANBAO00462 879 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 BUD31P41223 144 aaPredicted RBP22.05■■□□□ 1.12
VARS-217ENST00000440048 CLCN2P51788 898 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 IGLV3-21P80748 117 aaPredicted RBP22.05■■□□□ 1.12
VARS-217ENST00000440048 UBAP2LQ14157 1087 aaKnown RBP22.05■■□□□ 1.12
VARS-217ENST00000440048 TCHHL1Q5QJ38 904 aaPredicted RBP22.05■■□□□ 1.12
VARS-217ENST00000440048 METTL4Q8N3J2 472 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 SUN3Q8TAQ9 357 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 RDH11Q8TC12 318 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 GRHL3Q8TE85 626 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 PTPMT1Q8WUK0 201 aaPredicted RBP22.05■■□□□ 1.12
VARS-217ENST00000440048 TANKQ92844 425 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 DAZLQ92904 295 aaKnown RBP22.05■■□□□ 1.12
VARS-217ENST00000440048 UTP23Q9BRU9 249 aaKnown RBP22.05■■□□□ 1.12
VARS-217ENST00000440048 ROPN1BQ9BZX4 212 aaPredicted RBP22.05■■□□□ 1.12
VARS-217ENST00000440048 ROPN1Q9HAT0 212 aaPredicted RBP22.05■■□□□ 1.12
VARS-217ENST00000440048 BRF2Q9HAW0 419 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 ANKRD10Q9NXR5 420 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 AHSPQ9NZD4 102 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 LGALS13Q9UHV8 139 aa22.05■■□□□ 1.12
VARS-217ENST00000440048 PRAMEF2O60811 474 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 KRT6AP02538 564 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 KRT6BP04259 564 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 KLK1P06870 262 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 TNNI3P19429 210 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 TPP2P29144 1249 aaPredicted RBP22.04■■□□□ 1.12
VARS-217ENST00000440048 CD96P40200 585 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 KRT6CP48668 564 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 PKNOX1P55347 436 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 MLF1P58340 268 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 TRABD2AQ86V40 505 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 MREGQ8N565 214 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 CCDC63Q8NA47 563 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 C7orf57Q8NEG2 295 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 OR14A16Q8NHC5 309 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 METTL6Q8TCB7 284 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 SIGLEC12Q96PQ1 595 aa22.04■■□□□ 1.12
VARS-217ENST00000440048 HBEGFQ99075 208 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms