RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HDXQ7Z353 690 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 TLCD1Q96CP7 247 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 LMF1Q96S06 567 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 HBEGFQ99075 208 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 ADAP2Q9NPF8 381 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 SIRT5Q9NXA8 310 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 VTI1BQ9UEU0 232 aa11.07□□□□□ -0.64
HSPG2-206ENST00000439717 SMG1Q96Q15 3661 aaKnown RBP11.07□□□□□ -0.64
HSPG2-206ENST00000439717 PIEZO2Q9H5I5 2752 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 KALRNO60229 2985 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 A0A1W2PR48 441 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 B8ZZF3 427 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 RSL1D1O76021 490 aaKnown RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 SNUPNO95149 360 aaKnown RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 CHEK2O96017 543 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 GBAP04062 536 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 PRB1P04280 392 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 CELA2AP08217 269 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 ITGAMP11215 1152 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 NR1D1P20393 614 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 SOX11P35716 441 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 GSTM5P46439 218 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 MAPK12P53778 367 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 MAGOHP61326 146 aaKnown RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 IGLV3-21P80748 117 aaPredicted RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 HMGCS1Q01581 520 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 KLRB1Q12918 225 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 MFAP5Q13361 173 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 MPP2Q14168 576 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 ELAVL1Q15717 326 aaKnown RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 IMPG1Q17R60 797 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 ARL13AQ5H913 290 aaPredicted RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 AGBL2Q5U5Z8 902 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 KANK2Q63ZY3 851 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 C18orf63Q68DL7 685 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 GALNT18Q6P9A2 607 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 ISLR2Q6UXK2 745 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 ZCCHC23Q6ZST2 131 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 CLNKQ7Z7G1 428 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 CLYBLQ8N0X4 340 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 TMEM132CQ8N3T6 1108 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 C1orf52Q8N6N3 182 aaKnown RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 TEX19Q8NA77 164 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 NFAM1Q8NET5 270 aaPredicted RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 PPP1R14CQ8TAE6 165 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 BRIX1Q8TDN6 353 aaKnown RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 ELP5Q8TE02 316 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 PSMF1Q92530 271 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 ANKRD9Q96BM1 317 aaPredicted RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 ZBTB9Q96C00 473 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 METTL2AQ96IZ6 378 aaKnown RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 ALOXE3Q9BYJ1 711 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 SHCBP1LQ9BZQ2 653 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 EPS8L2Q9H6S3 715 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 VIPAS39Q9H9C1 493 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 TNFRSF12AQ9NP84 129 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 PNO1Q9NRX1 252 aaKnown RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 TEKT2Q9UIF3 430 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 MCM8Q9UJA3 840 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 ANAPC2Q9UJX6 822 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 PPIEQ9UNP9 301 aaKnown RBP11.06□□□□□ -0.64
HSPG2-206ENST00000439717 TRAF6Q9Y4K3 522 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 MED13Q9UHV7 2174 aa11.06□□□□□ -0.64
HSPG2-206ENST00000439717 TMEM120BA0PK00 339 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 A8MUA0 341 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 TMEM114B3SHH9 223 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 NPIPB8E9PQR5 432 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 TGFBR3LH3BV60 316 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 SLC28A1O00337 649 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 CDK2AP1O14519 115 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 FGF17O60258 216 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 LDB3O75112 727 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 MYO1DO94832 1006 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 GPR75O95800 540 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 AIFM1O95831 613 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 IFNA16P05015 189 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 SERPINE1P05121 402 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 CHRNGP07510 517 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 CHN1P15882 459 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 PRPH2P23942 346 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 GRK2P25098 689 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 SERPINB3P29508 390 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 ACSM2AQ08AH3 577 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 SPDYAQ5MJ70 313 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 NDUFAF5Q5TEU4 345 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 FAM219BQ5XKK7 198 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 ACSM2BQ68CK6 577 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 CLEC6AQ6EIG7 209 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 OR52E8Q6IFG1 317 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 H3F3CQ6NXT2 135 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 SCIMPQ6UWF3 145 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 PTRH1Q86Y79 214 aaKnown RBP11.05□□□□□ -0.64
HSPG2-206ENST00000439717 ZADH2Q8N4Q0 377 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 BOD1L1Q8NFC6 3051 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 B3GNT7Q8NFL0 401 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 OR14A16Q8NHC5 309 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 FAM76AQ8TAV0 307 aa11.05□□□□□ -0.64
HSPG2-206ENST00000439717 DAZLQ92904 295 aaKnown RBP11.05□□□□□ -0.64
HSPG2-206ENST00000439717 C11orf24Q96F05 449 aaPredicted RBP11.05□□□□□ -0.64
HSPG2-206ENST00000439717 APIPQ96GX9 242 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms