RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ZNF382Q96SR6 550 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 WDR41Q9HAD4 459 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 GRID1Q9ULK0 1009 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 PCDHGB6Q9Y5F9 930 aa23.09■■□□□ 1.29
RAPGEF1-206ENST00000438647 A0A0A6YYD5 115 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 TRBV11-1A0A0K0K1C0 115 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 ESPNB1AK53 854 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 COX7A2P14406 83 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 TSPAN8P19075 237 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 NAA20P61599 178 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 OC90Q02509 493 aaPredicted RBP23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 MRM1Q6IN84 353 aaKnown RBP23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 SH2D5Q6ZV89 423 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 ARMC10Q8N2F6 343 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 FAM26EQ8N5C1 309 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 MORN4Q8NDC4 146 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 SELENOMQ8WWX9 145 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 NCLNQ969V3 563 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 L3HYPDHQ96EM0 354 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 BRF2Q9HAW0 419 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 NMRK1Q9NWW6 199 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 ATG4BQ9Y4P1 393 aa23.08■■□□□ 1.29
RAPGEF1-206ENST00000438647 ESPL1Q14674 2120 aa23.08■■□□□ 1.28
RAPGEF1-206ENST00000438647 FLNCQ14315 2725 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 PPP6CO00743 305 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 EEDO75530 441 aaKnown RBP23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 CBX6O95503 412 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 KRT6AP02538 564 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 KRT6BP04259 564 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 NUDT17P0C025 328 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 FAM58BPP0C7Q3 252 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 MYL2P10916 166 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 CD46P15529 392 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 TNNI3P19429 210 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 CRHR1P34998 444 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 CD96P40200 585 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 KRT6CP48668 564 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 HNRNPH2P55795 449 aaKnown RBP23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 MLF1P58340 268 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 UBAP2LQ14157 1087 aaKnown RBP23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 OR1C1Q15619 314 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 SGO1Q5FBB7 561 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 ZNF766Q5HY98 468 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 GPRIN3Q6ZVF9 776 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 RIBC1Q8N443 379 aaPredicted RBP23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 ST6GALNAC3Q8NDV1 305 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 ANKRD9Q96BM1 317 aaPredicted RBP23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 OLAHQ9NV23 265 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 ADAM29Q9UKF5 820 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 ASB4Q9Y574 426 aa23.07■■□□□ 1.28
RAPGEF1-206ENST00000438647 A0A1B0GTL3 188 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 ARHGAP10A1A4S6 786 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 ANKUB1A6NFN9 424 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 COPEO14579 308 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 PROM1O43490 865 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 DYRK3O43781 588 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 FGF17O60258 216 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 MAN1A2O60476 641 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 ZFAND5O76080 213 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 OR4F21O95013 312 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 RASAL1O95294 804 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 NR2F6P10588 404 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 TPP2P29144 1249 aaPredicted RBP23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 GPR143P51810 404 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 IFFO1Q0D2I5 559 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 LCP2Q13094 533 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 MRPL49Q13405 166 aaKnown RBP23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 FHL5Q5TD97 284 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 ZYG11AQ6WRX3 759 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 MDS2Q8NDY4 140 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 C5orf34Q96MH7 638 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 DGAT2Q96PD7 388 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 ANKRD10Q9NXR5 420 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 EMCNQ9ULC0 261 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 SLC12A4Q9UP95 1085 aa23.06■■□□□ 1.28
RAPGEF1-206ENST00000438647 CLEC18AA5D8T8 446 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 CCDC151A5D8V7 595 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 C17orf105B2RV13 164 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 TMPRSS11DO60235 418 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 PDYNP01213 254 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 CRYABP02511 175 aaKnown RBP23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 EDN3P14138 238 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 KRT4P19013 534 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 CYB561P49447 251 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 PKNOX1P55347 436 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 IGLV3-21P80748 117 aaPredicted RBP23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 PLIN5Q00G26 463 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 ID2Q02363 134 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 C18orf63Q68DL7 685 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 CLEC18BQ6UXF7 455 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 CDYL2Q8N8U2 506 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 TMEM178AQ8NBL3 297 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 CLEC18CQ8NCF0 446 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 RDH11Q8TC12 318 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 AENQ8WTP8 325 aaKnown RBP23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 PTPMT1Q8WUK0 201 aaPredicted RBP23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 RBM18Q96H35 190 aaKnown RBP23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 SIGLEC12Q96PQ1 595 aa23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 PELOQ9BRX2 385 aaKnown RBP23.05■■□□□ 1.28
RAPGEF1-206ENST00000438647 MRPL1Q9BYD6 325 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms