RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 TMEM229AB2RXF0 380 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 PCDH7O60245 1069 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 GREM1O60565 184 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 ENTPD6O75354 484 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 LATS1O95835 1130 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 C1QBP02746 253 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 LAMP1P11279 417 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 ANXA8P13928 327 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 EVI2BP34910 448 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 NUDT1P36639 197 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 EPHB3P54753 998 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 SPHARQ15513 63 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 LEXMQ3ZCV2 418 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 LYPLAL1Q5VWZ2 237 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 NOXRED1Q6NXP6 359 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 KLHL17Q6TDP4 642 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 MACC1Q6ZN28 852 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 ZNF767PQ75MW2 155 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 OR4M2Q8NGB6 313 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 MTERF1Q99551 399 aaKnown RBP11.82□□□□□ -0.52
TMEM116-202ENST00000437003 TCF25Q9BQ70 676 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 GALNT9Q9HCQ5 603 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 ING3Q9NXR8 418 aa11.82□□□□□ -0.52
TMEM116-202ENST00000437003 A8MUA0 341 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 ZNF670-ZNF695F2Z2N8 137 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 SOD2P04179 222 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 HIST1H2AGP0C0S8 130 aaPredicted RBP11.81□□□□□ -0.52
TMEM116-202ENST00000437003 POLR2CP19387 275 aaPredicted RBP11.81□□□□□ -0.52
TMEM116-202ENST00000437003 HIST1H2ADP20671 130 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 PTGS2P35354 604 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 AP2S1P53680 142 aaPredicted RBP11.81□□□□□ -0.52
TMEM116-202ENST00000437003 WNT3P56703 355 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 TNK1Q13470 666 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 CDKN3Q16667 212 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 MICAQ29983 383 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 GPR33Q49SQ1 333 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 XKRXQ6PP77 449 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 TMIGD1Q6UXZ0 262 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 RTL10Q7L3V2 364 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 NAGSQ8N159 534 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 PGBD3Q8N328 593 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 SYNPOQ8N3V7 929 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 FBXL6Q8N531 539 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 HIST1H2AHQ96KK5 128 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 WDFY2Q96P53 400 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 HIST1H2AJQ99878 128 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 H2AFJQ9BTM1 129 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 ZNF334Q9HCZ1 680 aaPredicted RBP11.81□□□□□ -0.52
TMEM116-202ENST00000437003 C12orf4Q9NQ89 552 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 KLHL21Q9UJP4 597 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 SSR3Q9UNL2 185 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 PADI2Q9Y2J8 665 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 YARS2Q9Y2Z4 477 aaKnown RBP11.81□□□□□ -0.52
TMEM116-202ENST00000437003 MYO10Q9HD67 2058 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 FAM240BA0A1B0GVZ2 78 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 I3L521 148 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 SOX14O95416 240 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 IGFBP1P08833 259 aaPredicted RBP11.81□□□□□ -0.52
TMEM116-202ENST00000437003 CPN2P22792 545 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 HLA-DMAP28067 261 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 NSG1P42857 185 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 CTSOP43234 321 aaPredicted RBP11.81□□□□□ -0.52
TMEM116-202ENST00000437003 MAPK8P45983 427 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 MAP2K3P46734 347 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 B4GALNT1Q00973 533 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 LCN1P1Q5VSP4 162 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 TRIQKQ629K1 86 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 Q6ZNB5 142 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 OR8H3Q8N146 312 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 SYT14Q8NB59 555 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 AQP11Q8NBQ7 271 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 C19orf18Q8NEA5 215 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 CREB3L4Q8TEY5 395 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 TMEM169Q96HH4 297 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 GLTPQ9NZD2 209 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 COMMD3Q9UBI1 195 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 STUB1Q9UNE7 303 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 HCN4Q9Y3Q4 1203 aa11.81□□□□□ -0.52
TMEM116-202ENST00000437003 LOC102723532A0A0G2JNH3 316 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 CIB4A0PJX0 185 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 PRAMEF25A6NGN4 478 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 WASHC1A8K0Z3 465 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 SHOXO15266 292 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 SCN2BO60939 215 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 SOCS5O75159 536 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 GCM2O75603 506 aaPredicted RBP11.8□□□□□ -0.52
TMEM116-202ENST00000437003 IGSF6O95976 241 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 CKMP06732 381 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 HBQ1P09105 142 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 SERPINA4P29622 427 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 CD70P32970 193 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 CRATP43155 626 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.8□□□□□ -0.52
TMEM116-202ENST00000437003 NOGQ13253 232 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 WSCD2Q2TBF2 565 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 TOR1AIP1Q5JTV8 583 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 CRTC1Q6UUV9 634 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 SERPINA13PQ6UXR4 307 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 CREB3L2Q70SY1 520 aa11.8□□□□□ -0.52
TMEM116-202ENST00000437003 UPRTQ96BW1 309 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms