RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 LRR1Q96L50 414 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 RUNDC3BQ96NL0 473 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ERGIC2Q96RQ1 377 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ASCL2Q99929 193 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 AGPAT1Q99943 283 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 JPH2Q9BR39 696 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 NYXQ9GZU5 481 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 SIRPDQ9H106 197 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 GANQ9H2C0 597 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZNF696Q9H7X3 374 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 MTHFD2LQ9H903 347 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ATAD3AQ9NVI7 634 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 TMOD3Q9NYL9 352 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 TAS2R3Q9NYW6 316 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 TECRQ9NZ01 308 aaKnown RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZNF319Q9P2F9 582 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 DBF4Q9UBU7 674 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ICAM5Q9UMF0 924 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 EXOC7Q9UPT5 735 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ATP6V0A2Q9Y487 856 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR1A2Q9Y585 309 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 MSH6P52701 1360 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 A2ML1A8K2U0 1454 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 FRMPD1Q5SYB0 1578 aa2.69□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZMYM6O95789 1325 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 AFF2P51816 1311 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 A0A0U1RRA0 63 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 K7EQD1 137 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZNF195O14628 629 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 SURF4O15260 269 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 NXPH4O95158 308 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 TRIM16O95361 564 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 GAS8O95995 478 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 TGFAP01135 160 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 SFTPBP07988 381 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZNF26P17031 533 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 GPX3P22352 226 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 RPA1P27694 616 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 OPRL1P41146 370 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 NSFP46459 744 aaKnown RBP2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 PITPNBP48739 271 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 CAMLGP49069 296 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 FHITP49789 147 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCL11P51671 97 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 LBX1P52954 281 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 GSCP56915 257 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 HERV-K104P63124 156 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 DRP2Q13474 957 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 ITPK1Q13572 414 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 HEPACAMQ14CZ8 416 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 C3AR1Q16581 482 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZSWIM7Q19AV6 140 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 TMEM30BQ3MIR4 351 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 TEX35Q5T0J7 233 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 RUSC1-AS1Q66K80 236 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 SNRNP48Q6IEG0 339 aaKnown RBP2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 PWWP2BQ6NUJ5 590 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 BHLHB9Q6PI77 547 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 TMEM64Q6YI46 380 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 USP43Q70EL4 1123 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 CATSPER4Q7RTX7 472 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 ADGRD2Q7Z7M1 963 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 ITIH5Q86UX2 942 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 HOGA1Q86XE5 327 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 ERC1Q8IUD2 1116 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 WDR49Q8IV35 697 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR4N5Q8IXE1 308 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 ADAD2Q8NCV1 583 aaKnown RBP2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCNYQ8ND76 341 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 DDHD1Q8NEL9 900 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 NEK11Q8NG66 645 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR5M9Q8NGP3 310 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 MRGPRDQ8TDS7 321 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 GANCQ8TET4 914 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 SLCO2A1Q92959 643 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 RAB39BQ96DA2 213 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZNF486Q96H40 463 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 TAAR6Q96RI8 345 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 FSD1Q9BTV5 496 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 PINK1Q9BXM7 581 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 FTHL17Q9BXU8 183 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 DCLRE1BQ9H816 532 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 MARCH7Q9H992 704 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 HPF1Q9NWY4 346 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 ACTR3BQ9P1U1 418 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 NARFQ9UHQ1 456 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 TEKT2Q9UIF3 430 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 PROCRQ9UNN8 238 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 MRPS18CQ9Y3D5 142 aaKnown RBP2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 WIPI2Q9Y4P8 454 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 CLCA3PQ9Y6N3 262 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 TNRQ92752 1358 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 MED14O60244 1454 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 LRRC9Q6ZRR7 1453 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 MIA2Q96PC5 1412 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 RNF123Q5XPI4 1314 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 FAM205AQ6ZU69 1335 aa2.68□□□□□ -1.98
HMGB1P27-201ENST00000431429 REREQ9P2R6 1566 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 TMEM94Q12767 1356 aa2.67□□□□□ -1.98
HMGB1P27-201ENST00000431429 SH3PXD2BA1X283 911 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms