RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 ADAM17P78536 824 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 RBM39Q14498 530 aaKnown RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 LASP1Q14847 261 aaKnown RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 HERC3Q15034 1050 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 MS4A13Q5J8X5 152 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 C10orf62Q5T681 223 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 AADACL4Q5VUY2 407 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 NCBP2-AS2Q69YL0 99 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 TICAM1Q8IUC6 712 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 THAP3Q8WTV1 239 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 TMEM203Q969S6 136 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 DMRTB1Q96MA1 342 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 TSGA13Q96PP4 275 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 CGREF1Q99674 301 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 C1orf21Q9H246 121 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 MVB12BQ9H7P6 319 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 FBRSL1Q9HCM7 1045 aaKnown RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 ABCG2Q9UNQ0 655 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 STYXL1Q9Y6J8 313 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 MDFIC2A0A1B0GVS7 189 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 VSTM2BA6NLU5 285 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 CDC123O75794 336 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 CNMDO75829 334 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 H6PDO95479 791 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 C6orf47O95873 294 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 FUT4P22083 530 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 GABRA3P34903 492 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 ACVRL1P37023 503 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 RIDAP52758 137 aaKnown RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 GSTM4Q03013 218 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF805Q5CZA5 627 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 ASB15Q8WXK1 588 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 THAP4Q8WY91 577 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 MCHR1Q99705 422 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 ADAMTS10Q9H324 1103 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 IL23AQ9NPF7 189 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 PCDHB10Q9UN67 800 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 LOC730098B7Z3J9 87 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 TLX2O43763 284 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 NPR2P20594 1047 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 GPR143P51810 404 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 HNRNPKP61978 463 aaKnown RBP eCLIP8.6□□□□□ -1.036e-14■□□□□ 9.1
CTNND1-208ENST00000428599 IRF9Q00978 393 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 TMEM115Q12893 351 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-208ENST00000428599 GPRC6AQ5T6X5 926 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 ABHD17BQ5VST6 288 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 RPL13AP3Q6NVV1 102 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 SLC15A3Q8IY34 581 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 SEC14L1Q92503 715 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 COQ10BQ9H8M1 238 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 UCKL1Q9NWZ5 548 aa8.6□□□□□ -1.03
CTNND1-208ENST00000428599 M0QX08 132 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 SEC14L5O43304 696 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 C8BP07358 591 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 SOX9P48436 509 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 S100A12P80511 92 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 INCA1Q0VD86 236 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 LIN52Q52LA3 116 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 BORAQ6PGQ7 559 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF584Q8IVC4 421 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 GATSQ8NAP1 163 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 LRRC58Q96CX6 371 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 SGIP1Q9BQI5 828 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 PAPOLGQ9BWT3 736 aaKnown RBP8.59□□□□□ -1.03
CTNND1-208ENST00000428599 CD320Q9NPF0 282 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 LGALS13Q9UHV8 139 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 MGAT4BQ9UQ53 548 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 FLRT2O43155 660 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 MAFKO60675 156 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 RNH1P13489 461 aaKnown RBP8.59□□□□□ -1.03
CTNND1-208ENST00000428599 TNFSF4P23510 183 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 GJA5P36382 358 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ACADVLP49748 655 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 PSMA6P60900 246 aaKnown RBP8.59□□□□□ -1.03
CTNND1-208ENST00000428599 SRYQ05066 204 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 SLC18A2Q05940 514 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 DRICH1Q6PGQ1 229 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-208ENST00000428599 SMG8Q8ND04 991 aaKnown RBP8.59□□□□□ -1.03
CTNND1-208ENST00000428599 TOR1AIP2Q8NFQ8 470 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 OR4F6Q8NGB9 312 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 PROKR1Q8TCW9 393 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 DDIT4LQ96D03 193 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ARL5BQ96KC2 179 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF442Q9H7R0 627 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 OXSMQ9NWU1 459 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ANKRD34BA5PLL1 514 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 BCAS2O75934 225 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-208ENST00000428599 TPTEP56180 551 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 MVKQ03426 396 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF763Q0D2J5 394 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 TRAM1Q15629 374 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 TSTQ16762 297 aaKnown RBP8.59□□□□□ -1.03
CTNND1-208ENST00000428599 MORN1Q5T089 497 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 EMC10Q5UCC4 262 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 OR14L1PQ8NHC6 308 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 FCAMRQ8WWV6 532 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 LRIG1Q96JA1 1093 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 HINT2Q9BX68 163 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ZNF446Q9NWS9 450 aa8.59□□□□□ -1.03
CTNND1-208ENST00000428599 ABRACLQ9P1F3 81 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms