RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 PTBP2Q9UKA9 531 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 INTS6Q9UL03 887 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 NME7Q9Y5B8 376 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 A0A1W2PPC4 97 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 GNAO1P09471 354 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 CCL11P51671 97 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 RGS8P57771 180 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 OR1D5P58170 312 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 LARS2Q15031 903 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 OR4D1Q15615 310 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 FAM69BQ5VUD6 431 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 Q6ZNX1 250 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 ARMC8Q8IUR7 673 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 UBQLNLQ8IYU4 475 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 OR4F6Q8NGB9 312 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 TRUB1Q8WWH5 349 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 PDXPQ96GD0 296 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 SH3YL1Q96HL8 342 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 C3orf30Q96M34 536 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 OR6C1Q96RD1 312 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 ZDHHC5Q9C0B5 715 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 MRM3Q9HC36 420 aaKnown RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 ZBTB20Q9HC78 741 aaPredicted RBP10.19□□□□□ -0.78
TCOF1-204ENST00000427724 FGF21Q9NSA1 209 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 RPS6KA6Q9UK32 745 aa10.19□□□□□ -0.78
TCOF1-204ENST00000427724 TET1Q8NFU7 2136 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 PRSS51A0A1B0GVH4 220 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 C7orf72A4D263 438 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 AHCYP23526 432 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 ATP5A1P25705 553 aaKnown RBP10.18□□□□□ -0.78
TCOF1-204ENST00000427724 TBPL1P62380 186 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 PPP2CBP62714 309 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 PPP2CAP67775 309 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 TAB1Q15750 504 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 TYW3Q6IPR3 259 aaKnown RBP10.18□□□□□ -0.78
TCOF1-204ENST00000427724 TMC8Q8IU68 726 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 OR4N5Q8IXE1 308 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 UBE2J2Q8N2K1 259 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 FAM174AQ8TBP5 190 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 DAZLQ92904 295 aaKnown RBP10.18□□□□□ -0.78
TCOF1-204ENST00000427724 ZUFSPQ96AP4 578 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 PTERQ96BW5 349 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 LRRC46Q96FV0 321 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 CCNL2Q96S94 520 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-204ENST00000427724 PLAC1Q9HBJ0 212 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 FGF22Q9HCT0 170 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 PDP1Q9P0J1 537 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-204ENST00000427724 STOX2Q9P2F5 926 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-204ENST00000427724 LHX3Q9UBR4 397 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 UTS2RQ9UKP6 389 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 IKZF3Q9UKT9 509 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 SARDHQ9UL12 918 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 RTCAO00442 366 aaKnown RBP10.18□□□□□ -0.78
TCOF1-204ENST00000427724 SCRG1O75711 98 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 SERPINA1P01009 418 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 ENGP17813 658 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 NR4A2P43354 598 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 LAPTM4AQ15012 233 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 GPR68Q15743 365 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 AHSA2Q719I0 299 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 PIWIL3Q7Z3Z3 882 aaKnown RBP10.18□□□□□ -0.78
TCOF1-204ENST00000427724 ZNF605Q86T29 641 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 ITPKCQ96DU7 683 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 GSTO2Q9H4Y5 243 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 TMEM27Q9HBJ8 222 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 FSCN3Q9NQT6 498 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 CLEC1BQ9P126 229 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 EPHA6Q9UF33 1036 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 RAPGEFL1Q9UHV5 662 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 AP3M1Q9Y2T2 418 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 A0A0A6YYC8 382 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-204ENST00000427724 CDC14CA4D256 554 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 I3L1I5 382 aaPredicted RBP10.18□□□□□ -0.78
TCOF1-204ENST00000427724 TP53I11O14683 189 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 SLC16A8O95907 504 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 SNTA1Q13424 505 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 MEP1AQ16819 746 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 SYT16Q17RD7 645 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 RFX4Q33E94 735 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 C6orf136Q5SQH8 315 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 CEACAM20Q6UY09 585 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 IGFN1Q86VF2 1251 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 OR52J3Q8NH60 311 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 IFI44Q8TCB0 444 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 OR1E3Q8WZA6 343 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 ZFYVE21Q9BQ24 234 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 TPK1Q9H3S4 243 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 Q9N2J8 555 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 AMBNQ9NP70 447 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 TMEM9Q9P0T7 183 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 ACAD8Q9UKU7 415 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 PLCL2Q9UPR0 1127 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 PCDHGB5Q9Y5G0 923 aa10.18□□□□□ -0.78
TCOF1-204ENST00000427724 SLC16A5O15375 505 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 WBP4O75554 376 aaKnown RBP10.17□□□□□ -0.78
TCOF1-204ENST00000427724 FUCA1P04066 466 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 FMO3P31513 532 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 ITGA1P56199 1179 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 ABATP80404 500 aa10.17□□□□□ -0.78
TCOF1-204ENST00000427724 FCHO2Q0JRZ9 810 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms