RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 RCN2Q14257 317 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 EIF2S3LQ2VIR3 472 aaKnown RBP13.88□□□□□ -0.19
RTN4-210ENST00000427710 GGTA1PQ4G0N0 100 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 TUBA3EQ6PEY2 450 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 CYP20A1Q6UW02 462 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 C16orf47Q6ZP98 133 aaPredicted RBP13.88□□□□□ -0.19
RTN4-210ENST00000427710 GPR180Q86V85 440 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 RPS19BP1Q86WX3 136 aaKnown RBP13.88□□□□□ -0.19
RTN4-210ENST00000427710 CCNYL1Q8N7R7 359 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 CDYL2Q8N8U2 506 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 APCDD1LQ8NCL9 501 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 GALNT11Q8NCW6 608 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 B3GNT7Q8NFL0 401 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 SELENOMQ8WWX9 145 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 ZBTB9Q96C00 473 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 SERPINI1Q99574 410 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 MRPL1Q9BYD6 325 aaKnown RBP13.88□□□□□ -0.19
RTN4-210ENST00000427710 DEFB126Q9BYW3 111 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 ELOVL6Q9H5J4 265 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 ADAP2Q9NPF8 381 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 KLHL1Q9NR64 748 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 TEKT2Q9UIF3 430 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 SLC12A4Q9UP95 1085 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 ASB4Q9Y574 426 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 SPACA6W5XKT8 324 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 DNAJC13O75165 2243 aa13.88□□□□□ -0.19
RTN4-210ENST00000427710 ZNF407Q9C0G0 2248 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 SPTAN1Q13813 2472 aaKnown RBP13.87□□□□□ -0.19
RTN4-210ENST00000427710 TRAV17A0A0B4J275 112 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 A0A1W2PR48 441 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 KLK1P06870 262 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 FAM58BPP0C7Q3 252 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 MYL2P10916 166 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 CHN1P15882 459 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 TPP2P29144 1249 aaPredicted RBP13.87□□□□□ -0.19
RTN4-210ENST00000427710 CD96P40200 585 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 HTR6P50406 440 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 TNFRSF17Q02223 184 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 OC90Q02509 493 aaPredicted RBP13.87□□□□□ -0.19
RTN4-210ENST00000427710 SPINK14Q6IE38 97 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 MRM1Q6IN84 353 aaKnown RBP13.87□□□□□ -0.19
RTN4-210ENST00000427710 SCIMPQ6UWF3 145 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 ZYG11AQ6WRX3 759 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 DGAT2L6Q6ZPD8 337 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 GPRIN3Q6ZVF9 776 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 LCA5Q86VQ0 697 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 ZCCHC7Q8N3Z6 543 aaKnown RBP13.87□□□□□ -0.19
RTN4-210ENST00000427710 SLC5A8Q8N695 610 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 CCDC63Q8NA47 563 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 PTPMT1Q8WUK0 201 aaPredicted RBP13.87□□□□□ -0.19
RTN4-210ENST00000427710 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.87□□□□□ -0.19
RTN4-210ENST00000427710 PPWD1Q96BP3 646 aaKnown RBP13.87□□□□□ -0.19
RTN4-210ENST00000427710 TAAR6Q96RI8 345 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 KCNA7Q96RP8 456 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 RNF32Q9H0A6 362 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 GSTO2Q9H4Y5 243 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 RPF2Q9H7B2 306 aaKnown RBP13.87□□□□□ -0.19
RTN4-210ENST00000427710 DDX31Q9H8H2 851 aaKnown RBP13.87□□□□□ -0.19
RTN4-210ENST00000427710 TRPS1Q9UHF7 1281 aa13.87□□□□□ -0.19
RTN4-210ENST00000427710 A0A1W2PS29 197 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 C17orf105B2RV13 164 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 MANBAO00462 879 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 COPEO14579 308 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 PROM1O43490 865 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 PLIN3O60664 434 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 PRAMEF2O60811 474 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 CDH16O75309 829 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 AIFM1O95831 613 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 KRT4P19013 534 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 CRHR1P34998 444 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 CLCN2P51788 898 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 GPR143P51810 404 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 MLF1P58340 268 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 FOLH1Q04609 750 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 OR1C1Q15619 314 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 ELAVL1Q15717 326 aaKnown RBP13.86□□□□□ -0.19
RTN4-210ENST00000427710 ZNF766Q5HY98 468 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 NUDT13Q86X67 352 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 SLC22A9Q8IVM8 553 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 TMEM132CQ8N3T6 1108 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 L3HYPDHQ96EM0 354 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 VMP1Q96GC9 406 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 ZNF382Q96SR6 550 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 UTP23Q9BRU9 249 aaKnown RBP13.86□□□□□ -0.19
RTN4-210ENST00000427710 PARD6BQ9BYG5 372 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 SLC29A3Q9BZD2 475 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 SHCBP1LQ9BZQ2 653 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 OR8D2Q9GZM6 311 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 LYARQ9NX58 379 aaKnown RBP13.86□□□□□ -0.19
RTN4-210ENST00000427710 TEX10Q9NXF1 929 aaPredicted RBP13.86□□□□□ -0.19
RTN4-210ENST00000427710 PSD3Q9NYI0 1048 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 ABI3Q9P2A4 366 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 VTI1BQ9UEU0 232 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 PHF11Q9UIL8 331 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 TIMM22Q9Y584 194 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 HECTD1Q9ULT8 2610 aa13.86□□□□□ -0.19
RTN4-210ENST00000427710 HRKO00198 91 aa13.85□□□□□ -0.19
RTN4-210ENST00000427710 PGRMC2O15173 223 aa13.85□□□□□ -0.19
RTN4-210ENST00000427710 SPAG7O75391 227 aa13.85□□□□□ -0.19
RTN4-210ENST00000427710 CBX6O95503 412 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms