RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 E2F2Q14209 437 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 CDSNQ15517 529 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 OR1C1Q15619 314 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.87□□□□□ -0.51
SGCE-203ENST00000425444 AP5B1Q2VPB7 878 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 GTF2H2CQ6P1K8 395 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 TUBA3EQ6PEY2 450 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 MEX3BQ6ZN04 569 aaKnown RBP11.87□□□□□ -0.51
SGCE-203ENST00000425444 RPS19BP1Q86WX3 136 aaKnown RBP11.87□□□□□ -0.51
SGCE-203ENST00000425444 SCUBE1Q8IWY4 988 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 LGI4Q8N135 537 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 PLD6Q8N2A8 252 aaKnown RBP11.87□□□□□ -0.51
SGCE-203ENST00000425444 HORMAD2Q8N7B1 307 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 PTGR2Q8N8N7 351 aaPredicted RBP11.87□□□□□ -0.51
SGCE-203ENST00000425444 TMEM52Q8NDY8 209 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 CHDHQ8NE62 594 aaPredicted RBP11.87□□□□□ -0.51
SGCE-203ENST00000425444 HUS1BQ8NHY5 278 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 ELP5Q8TE02 316 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 ATP6V1E2Q96A05 226 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 ISL2Q96A47 359 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 REPS1Q96D71 796 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 PHF21BQ96EK2 531 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 CMTM7Q96FZ5 175 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 GPR78Q96P69 363 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 NPAS2Q99743 824 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 RHOXF2Q9BQY4 288 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 TBCDQ9BTW9 1192 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 OR51B5Q9H339 312 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 IPPKQ9H8X2 491 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 KLHL1Q9NR64 748 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 ZNF358Q9NW07 568 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 XPR1Q9UBH6 696 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 ADGRE2Q9UHX3 823 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 ZNF180Q9UJW8 692 aa11.87□□□□□ -0.51
SGCE-203ENST00000425444 FN1P02751 2386 aaKnown RBP11.87□□□□□ -0.51
SGCE-203ENST00000425444 FBN1P35555 2871 aaKnown RBP11.86□□□□□ -0.51
SGCE-203ENST00000425444 TRBV11-1A0A0K0K1C0 115 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 SYNDIG1LA6NDD5 238 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 FCHO1O14526 889 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 KLK8O60259 260 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 MAN1A2O60476 641 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 SIX3O95343 332 aaPredicted RBP11.86□□□□□ -0.51
SGCE-203ENST00000425444 CRYABP02511 175 aaKnown RBP11.86□□□□□ -0.51
SGCE-203ENST00000425444 SNRPAP09012 282 aaKnown RBP11.86□□□□□ -0.51
SGCE-203ENST00000425444 CD46P15529 392 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 HIST1H1TP22492 207 aaPredicted RBP11.86□□□□□ -0.51
SGCE-203ENST00000425444 ATP5A1P25705 553 aaKnown RBP11.86□□□□□ -0.51
SGCE-203ENST00000425444 EEF1DP29692 281 aaKnown RBP11.86□□□□□ -0.51
SGCE-203ENST00000425444 PPP2R1BP30154 601 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 MAGEA12P43365 314 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 CLCN2P51788 898 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 PMP22Q01453 160 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 RBPJQ06330 500 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 PCBP2Q15366 365 aaKnown RBP eCLIP11.86□□□□□ -0.51
SGCE-203ENST00000425444 TERF2Q15554 542 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 CPSF6Q16630 551 aaKnown RBP eCLIP11.86□□□□□ -0.51
SGCE-203ENST00000425444 LGSNQ5TDP6 509 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 KHDRBS2Q5VWX1 349 aaKnown RBP11.86□□□□□ -0.51
SGCE-203ENST00000425444 LIPJQ5W064 366 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 ZNF793Q6ZN11 406 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 GOLGA7Q7Z5G4 137 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 RNF175Q8N4F7 328 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 ACOT4Q8N9L9 421 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 B3GNT7Q8NFL0 401 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 DCAKDQ8WVC6 231 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 SIGLEC12Q96PQ1 595 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 TAAR6Q96RI8 345 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 MTERF1Q99551 399 aaKnown RBP11.86□□□□□ -0.51
SGCE-203ENST00000425444 MDFIQ99750 246 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 CCDC77Q9BR77 488 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 LYRM4Q9HD34 91 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 ADAP2Q9NPF8 381 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 DMRT3Q9NQL9 472 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 PRDM7Q9NQW5 492 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 SEC14L3Q9UDX4 400 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 FBXW2Q9UKT8 454 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 TMCO1Q9UM00 188 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 PCDHGA11Q9Y5H2 935 aa11.86□□□□□ -0.51
SGCE-203ENST00000425444 TGFBR3LH3BV60 316 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 UGDHO60701 494 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 ABHD2P08910 425 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 COL6A2P12110 1019 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 CPN2P22792 545 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 TPP2P29144 1249 aaPredicted RBP11.85□□□□□ -0.51
SGCE-203ENST00000425444 CD96P40200 585 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 PIK3CBP42338 1070 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 CCNG1P51959 295 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 RPS13P62277 151 aaKnown RBP11.85□□□□□ -0.51
SGCE-203ENST00000425444 PCDH1Q08174 1060 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 ELAVL1Q15717 326 aaKnown RBP11.85□□□□□ -0.51
SGCE-203ENST00000425444 SPINK14Q6IE38 97 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 METTL2BQ6P1Q9 378 aaKnown RBP11.85□□□□□ -0.51
SGCE-203ENST00000425444 TRMT10CQ7L0Y3 403 aaKnown RBP11.85□□□□□ -0.51
SGCE-203ENST00000425444 UBE3DQ7Z6J8 389 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 TMEM178AQ8NBL3 297 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 FAM98AQ8NCA5 519 aaKnown RBP11.85□□□□□ -0.51
SGCE-203ENST00000425444 MDS2Q8NDY4 140 aa11.85□□□□□ -0.51
SGCE-203ENST00000425444 NFAM1Q8NET5 270 aaPredicted RBP11.85□□□□□ -0.51
SGCE-203ENST00000425444 THAP3Q8WTV1 239 aaPredicted RBP11.85□□□□□ -0.51
SGCE-203ENST00000425444 NCLNQ969V3 563 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms