RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 A0A1W2PRB8 838 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 CCDC182A6NF36 153 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 J3KTA2 159 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 SSX4O60224 188 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 KLHL18O94889 574 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 ACADMP11310 421 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 ERP29P30040 261 aaKnown RBP14.51□□□□□ -0.09
C9orf3-204ENST00000424143 CD70P32970 193 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 ZNF91Q05481 1191 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 RIPPLY1Q0D2K3 151 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 C2orf80Q0P641 193 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 CRHR2Q13324 411 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 CAMK2BQ13554 666 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 TPBGQ13641 420 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 PUM1Q14671 1186 aaKnown RBP eCLIP14.51□□□□□ -0.09
C9orf3-204ENST00000424143 BAK1Q16611 211 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 DUSP7Q16829 419 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 TBRG1Q3YBR2 411 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 GPAT3Q53EU6 434 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 KLHL22Q53GT1 634 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 DCST1Q5T197 706 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 CST9Q5W186 159 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 SAXO2Q658L1 398 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 CASP12Q6UXS9 341 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 RFLNAQ6ZTI6 216 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 ARMCX6Q7L4S7 300 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 VASH1Q7L8A9 365 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-204ENST00000424143 PEX5LQ8IYB4 626 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 CACTIN-AS1Q8N1I8 211 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 ZNF557Q8N988 423 aaPredicted RBP14.51□□□□□ -0.09
C9orf3-204ENST00000424143 DBF4BQ8NFT6 615 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 SETD7Q8WTS6 366 aaKnown RBP14.51□□□□□ -0.09
C9orf3-204ENST00000424143 OR5P2Q8WZ92 322 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 NEDD4LQ96PU5 975 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 NLNQ9BYT8 704 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 MARCH7Q9H992 704 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 IL21Q9HBE4 155 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 PRDM8Q9NQV8 689 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 ITM2CQ9NQX7 267 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 TAS2R16Q9NYV7 291 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 TESQ9UGI8 421 aaKnown RBP14.51□□□□□ -0.09
C9orf3-204ENST00000424143 PHF11Q9UIL8 331 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 MAU2Q9Y6X3 613 aa14.51□□□□□ -0.09
C9orf3-204ENST00000424143 TMEM129A0AVI4 362 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 CARNS1A5YM72 827 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 A8MX80 341 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 FFAR1O14842 300 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 GRM6O15303 877 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 ATG13O75143 517 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 MYCP01106 439 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-204ENST00000424143 CYP17A1P05093 508 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 CKMT1AP12532 417 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 FGF9P31371 208 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-204ENST00000424143 ZNF157P51786 506 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-204ENST00000424143 XKP51811 444 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 GNG2P59768 71 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 EFNB1P98172 346 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 GPNMBQ14956 572 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 SEC23BQ15437 767 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 PLK5Q496M5 336 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 ZNF658BQ4V348 819 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-204ENST00000424143 HENMT1Q5T8I9 393 aaKnown RBP14.5□□□□□ -0.09
C9orf3-204ENST00000424143 GDPD4Q6W3E5 623 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 GPR65Q8IYL9 337 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 OR4K1Q8NGD4 311 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 ANGPTL6Q8NI99 470 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 FGF11Q92914 225 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 IGSF21Q96ID5 467 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 FRMD6Q96NE9 622 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 VN1R3Q9BXE9 311 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 POLR2J2Q9GZM3 115 aaKnown RBP14.5□□□□□ -0.09
C9orf3-204ENST00000424143 MIXL1Q9H2W2 232 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 EXOSC4Q9NPD3 245 aaKnown RBP14.5□□□□□ -0.09
C9orf3-204ENST00000424143 DIABLOQ9NR28 239 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 RAB23Q9ULC3 237 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 SLC6A14Q9UN76 642 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 DYRK1BQ9Y463 629 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 PCDHGB7Q9Y5F8 929 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 SNX11Q9Y5W9 270 aa14.5□□□□□ -0.09
C9orf3-204ENST00000424143 B4DXG7 233 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 TNFRSF10AO00220 468 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 POLR1CO15160 346 aaPredicted RBP14.49□□□□□ -0.09
C9orf3-204ENST00000424143 RAB36O95755 333 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 SOD2P04179 222 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 H1F0P07305 194 aaKnown RBP14.49□□□□□ -0.09
C9orf3-204ENST00000424143 HBQ1P09105 142 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 SLC10A3P09131 477 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 CTSAP10619 480 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 ELAVL4P26378 380 aaKnown RBP14.49□□□□□ -0.09
C9orf3-204ENST00000424143 DGKGP49619 791 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 DOC2BQ14184 412 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 HEPACAMQ14CZ8 416 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 SYTL3Q4VX76 610 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 ZNF628Q5EBL2 1059 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 DDI2Q5TDH0 399 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 PPP2R2DQ66LE6 453 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 MRGPREQ86SM8 312 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 PLCZ1Q86YW0 608 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 NRSN1Q8IZ57 195 aa14.49□□□□□ -0.09
C9orf3-204ENST00000424143 SLC34A3Q8N130 599 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms