RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SPATA9Q9BWV2 254 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 C1GALT1Q9NS00 363 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 OLAHQ9NV23 265 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 SUSD2Q9UGT4 822 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 PILRBQ9UKJ0 227 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 UTS2RQ9UKP6 389 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 CSNK1G3Q9Y6M4 447 aa19.83■□□□□ 0.77
GPC1-202ENST00000420138 SLC9B1P1A6NJY1 282 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 GUCY1B2O75343 617 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 LINGO3P0C6S8 592 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 ETFAP13804 333 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 DDX5P17844 614 aaKnown RBP19.83■□□□□ 0.76
GPC1-202ENST00000420138 IL1RNP18510 177 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 UQCRC2P22695 453 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 RXRGP48443 463 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 CDK9P50750 372 aaKnown RBP19.83■□□□□ 0.76
GPC1-202ENST00000420138 CHN2P52757 468 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 CASP9P55211 416 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 SUZ12Q15022 739 aaKnown RBP19.83■□□□□ 0.76
GPC1-202ENST00000420138 DEFB134Q4QY38 66 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 C6orf132Q5T0Z8 1188 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 SLC48A1Q6P1K1 146 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 ARHGEF39Q8N4T4 335 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 FBXO30Q8TB52 745 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 NCLNQ969V3 563 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 RERGQ96A58 199 aaPredicted RBP19.83■□□□□ 0.76
GPC1-202ENST00000420138 ELF4Q99607 663 aaPredicted RBP19.83■□□□□ 0.76
GPC1-202ENST00000420138 MAP3K3Q99759 626 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 GLIPR2Q9H4G4 154 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 LYARQ9NX58 379 aaKnown RBP19.83■□□□□ 0.76
GPC1-202ENST00000420138 RNF215Q9Y6U7 377 aa19.83■□□□□ 0.76
GPC1-202ENST00000420138 FAM149AA5PLN7 773 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 ZSCAN9O15535 394 aaPredicted RBP19.82■□□□□ 0.76
GPC1-202ENST00000420138 KIF1CO43896 1103 aaKnown RBP19.82■□□□□ 0.76
GPC1-202ENST00000420138 PRKD3O94806 890 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 SERPINA1P01009 418 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 MT-ND1P03886 318 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 EIF2S1P05198 315 aaKnown RBP19.82■□□□□ 0.76
GPC1-202ENST00000420138 CDH3P22223 829 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 FASP25445 335 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 DUSP2Q05923 314 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 RUNX2Q13950 521 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 COL9A2Q14055 689 aaPredicted RBP19.82■□□□□ 0.76
GPC1-202ENST00000420138 VEZF1Q14119 521 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 ZNF528Q3MIS6 628 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 MANEAQ5SRI9 462 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 PRSS41Q7RTY9 318 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 PIGKQ92643 395 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 MAL2Q969L2 176 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 CNRIP1Q96F85 164 aaPredicted RBP19.82■□□□□ 0.76
GPC1-202ENST00000420138 ZBED6CLQ96FA7 236 aaPredicted RBP19.82■□□□□ 0.76
GPC1-202ENST00000420138 ZC3H10Q96K80 434 aaKnown RBP19.82■□□□□ 0.76
GPC1-202ENST00000420138 ZNF597Q96LX8 424 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 RNF145Q96MT1 663 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 AMDHD1Q96NU7 426 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 SERINC2Q96SA4 455 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 ASPSCR1Q9BZE9 553 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 NEUROD4Q9HD90 331 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 ZSCAN32Q9NX65 697 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 RAPGEFL1Q9UHV5 662 aa19.82■□□□□ 0.76
GPC1-202ENST00000420138 NUP214P35658 2090 aaPredicted RBP19.82■□□□□ 0.76
GPC1-202ENST00000420138 A0A1W2PS29 197 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 C9P02748 559 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 SP9P0CG40 484 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 FCGR1AP12314 374 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 ALOX12P18054 663 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 SOAT1P35610 550 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 CRYBA2P53672 197 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 HSPB3Q12988 150 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 ANGPT1Q15389 498 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 ZNF750Q32MQ0 723 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 SAXO2Q658L1 398 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 RNF130Q86XS8 419 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 ST13P4Q8IZP2 240 aaPredicted RBP19.81■□□□□ 0.76
GPC1-202ENST00000420138 SHISA5Q8N114 240 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 DNAJC22Q8N4W6 341 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 CSNK1A1LQ8N752 337 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 SUN3Q8TAQ9 357 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 C10orf90Q96M02 699 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 ROGDIQ9GZN7 287 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 ADAMTS9Q9P2N4 1935 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 LAMA1P25391 3075 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 RNF103-CHMP3A0A140T963 221 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 URADA6NGE7 173 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 MYO1GB0I1T2 1018 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 GCM2O75603 506 aaPredicted RBP19.81■□□□□ 0.76
GPC1-202ENST00000420138 RAP2AP10114 183 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 KDELR2P33947 212 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 CRATP43155 626 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 CCT8P50990 548 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 GFERP55789 205 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 VSX2P58304 361 aaPredicted RBP19.81■□□□□ 0.76
GPC1-202ENST00000420138 CEBPEQ15744 281 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 NRF1Q16656 503 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 DEFB110Q30KQ9 67 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 C6orf52Q5T4I8 152 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 ZBTB49Q6ZSB9 765 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 FAM92BQ6ZTR7 304 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 ABHD13Q7L211 337 aa19.81■□□□□ 0.76
GPC1-202ENST00000420138 SLC35F3Q8IY50 421 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms