RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CTSBP07858 339 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 ABCB1P08183 1280 aaPredicted RBP13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 HBQ1P09105 142 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 NR2F6P10588 404 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 PGM1P36871 562 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 TSPAN7P41732 249 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 AVPR1BP47901 424 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 SEPHS1P49903 392 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 PDX1P52945 283 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 RAB38P57729 211 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 SNRPNP63162 240 aaKnown RBP13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 MC1RQ01726 317 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 KCNAB1Q14722 419 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 PGS1Q32NB8 556 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 ZNF385BQ569K4 471 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 RUNDC3AQ59EK9 446 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 PIGGQ5H8A4 983 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 CPZQ66K79 652 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 OR52E8Q6IFG1 317 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 RHBDD2Q6NTF9 364 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 RBM44Q6ZP01 1051 aaKnown RBP13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 DHDDSQ86SQ9 333 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 CA13Q8N1Q1 262 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 BMPERQ8N8U9 685 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 GFM2Q969S9 779 aaKnown RBP13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 MCUR1Q96AQ8 359 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 ZBED6CLQ96FA7 236 aaPredicted RBP13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 ZNF681Q96N22 645 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 ANKRD27Q96NW4 1050 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 OR1F2PQ96R84 312 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 CGREF1Q99674 301 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 MAPKAP1Q9BPZ7 522 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 DPH2Q9BQC3 489 aaPredicted RBP13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 SPRTNQ9H040 489 aaPredicted RBP13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 ZMYND15Q9H091 742 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 SLC35C2Q9NQQ7 365 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 CUTCQ9NTM9 273 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 TOR4AQ9NXH8 423 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 SH3BP4Q9P0V3 963 aa13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 ZNF282Q9UDV7 671 aaPredicted RBP13.46□□□□□ -0.25
SHMT1P1-201ENST00000419974 ASXL3Q9C0F0 2248 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 A0A0G2JN53 185 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 DSCR3O14972 297 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 CASC3O15234 703 aaKnown RBP13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 ZNF749O43361 778 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 MED26O95402 600 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 HSD17B1P14061 328 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 IL1RNP18510 177 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 CPN2P22792 545 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 PPIBP23284 216 aaKnown RBP13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 PPP2R1BP30154 601 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 EEFSECP57772 596 aaKnown RBP13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 MC2RQ01718 297 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 GPR19Q15760 415 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 SAMD4BQ5PRF9 694 aaKnown RBP13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 NANOGP8Q6NSW7 305 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 BNC2Q6ZN30 1099 aaPredicted RBP13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 GPR155Q7Z3F1 870 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 SLC15A3Q8IY34 581 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 ZNF595Q8IYB9 648 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 FBXW8Q8N3Y1 598 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 ZCCHC10Q8TBK6 192 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 NUDT8Q8WV74 236 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 SLC45A3Q96JT2 553 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 LRFN5Q96NI6 719 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 NDC1Q9BTX1 674 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 RPF2Q9H7B2 306 aaKnown RBP13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 NANOGQ9H9S0 305 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 TAS2R9Q9NYW1 312 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 SLAMF8Q9P0V8 285 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 UTS2RQ9UKP6 389 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 ERVK-11Q9UQG0 969 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 PCDHB14Q9Y5E9 798 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 CEP295Q9C0D2 2601 aa13.45□□□□□ -0.26
SHMT1P1-201ENST00000419974 A0A1B0GX78 115 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 A0A1W2PRB8 838 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 STATHP02808 62 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 CYC1P08574 325 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 RNH1P13489 461 aaKnown RBP13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 CSTF2P33240 577 aaKnown RBP eCLIP13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 RORAP35398 523 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 KCNJ2P63252 427 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 IGLV3-21P80748 117 aaPredicted RBP13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 TXNL4AP83876 142 aaKnown RBP13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 VAC14Q08AM6 782 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 EIF3IQ13347 325 aaKnown RBP13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 DSG2Q14126 1118 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 PRSS53Q2L4Q9 553 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 SNAP47Q5SQN1 464 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 C18orf63Q68DL7 685 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 TMEM64Q6YI46 380 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 PRSS41Q7RTY9 318 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 SCUBE1Q8IWY4 988 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 MSRB3Q8IXL7 192 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 ULK2Q8IYT8 1036 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 KIF2BQ8N4N8 673 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 TRIML2Q8N7C3 387 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 OR9A4Q8NGU2 314 aa13.44□□□□□ -0.26
SHMT1P1-201ENST00000419974 ZFP28Q8NHY6 868 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms