RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 MYOTQ9UBF9 498 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 IKBKGQ9Y6K9 419 aa23.56■■□□□ 1.36
VEGFA-208ENST00000417285 TFECO14948 347 aaPredicted RBP23.55■■□□□ 1.36
VEGFA-208ENST00000417285 SCELO95171 688 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 TGFB1P01137 390 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 PIK3CBP42338 1070 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 ARFIP1P53367 373 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 ADORA2A-AS1P86434 159 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 KHDRBS2Q5VWX1 349 aaKnown RBP23.55■■□□□ 1.36
VEGFA-208ENST00000417285 OR4C11Q6IEV9 310 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 ZNF793Q6ZN11 406 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 SLC44A1Q8WWI5 657 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 CENPKQ9BS16 269 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 VPS11Q9H270 941 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 TSC22D4Q9Y3Q8 395 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 TACC2O95359 2948 aa23.55■■□□□ 1.36
VEGFA-208ENST00000417285 TMEM200CA6NKL6 621 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 A8MVJ9 347 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 E9PLN8 166 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 OR2J2O76002 312 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 SERPINB9P50453 376 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 UBAP2Q5T6F2 1119 aaKnown RBP23.54■■□□□ 1.36
VEGFA-208ENST00000417285 LIPJQ5W064 366 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 MDGA2Q7Z553 956 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 DOLPP1Q86YN1 238 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 MYLK4Q86YV6 388 aaPredicted RBP23.54■■□□□ 1.36
VEGFA-208ENST00000417285 CHERPQ8IWX8 916 aaKnown RBP23.54■■□□□ 1.36
VEGFA-208ENST00000417285 OR5L2Q8NGL0 311 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 ASB15Q8WXK1 588 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 RGMAQ96B86 450 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 VKORC1Q9BQB6 163 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 ACTR8Q9H981 624 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 HPF1Q9NWY4 346 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 PCDHGA11Q9Y5H2 935 aa23.54■■□□□ 1.36
VEGFA-208ENST00000417285 TNPO3Q9Y5L0 923 aaKnown RBP23.54■■□□□ 1.36
VEGFA-208ENST00000417285 C17orf105B2RV13 164 aa23.53■■□□□ 1.36
VEGFA-208ENST00000417285 KLK8O60259 260 aa23.53■■□□□ 1.36
VEGFA-208ENST00000417285 PRKNO60260 465 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-208ENST00000417285 CPN2P22792 545 aa23.53■■□□□ 1.36
VEGFA-208ENST00000417285 PTX3P26022 381 aaPredicted RBP23.53■■□□□ 1.36
VEGFA-208ENST00000417285 GRNP28799 593 aaKnown RBP23.53■■□□□ 1.36
VEGFA-208ENST00000417285 SSR2P43308 183 aa23.53■■□□□ 1.36
VEGFA-208ENST00000417285 PIK3CGP48736 1102 aa23.53■■□□□ 1.36
VEGFA-208ENST00000417285 PCBP2Q15366 365 aaKnown RBP eCLIP23.53■■□□□ 1.361e-10■■□□□ 11.4
VEGFA-208ENST00000417285 METTL2BQ6P1Q9 378 aaKnown RBP23.53■■□□□ 1.36
VEGFA-208ENST00000417285 AGAP11Q8TF27 550 aa23.53■■□□□ 1.36
VEGFA-208ENST00000417285 PHF10Q8WUB8 498 aaKnown RBP23.53■■□□□ 1.36
VEGFA-208ENST00000417285 GPR78Q96P69 363 aa23.53■■□□□ 1.36
VEGFA-208ENST00000417285 PAFAH2Q99487 392 aa23.53■■□□□ 1.36
VEGFA-208ENST00000417285 OR8D2Q9GZM6 311 aa23.53■■□□□ 1.36
VEGFA-208ENST00000417285 CPSF2Q9P2I0 782 aaKnown RBP23.53■■□□□ 1.36
VEGFA-208ENST00000417285 RTCAO00442 366 aaKnown RBP23.52■■□□□ 1.36
VEGFA-208ENST00000417285 UGDHO60701 494 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 LDB3O75112 727 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 SH3BGRLO75368 114 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 COX7A2P14406 83 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 TLX1P31314 330 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-208ENST00000417285 PTGS2P35354 604 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 PTGER4P35408 488 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 PHEXP78562 749 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 SLAMF1Q13291 335 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 DDX39BQ13838 428 aaKnown RBP23.52■■□□□ 1.36
VEGFA-208ENST00000417285 RGS9BPQ6ZS82 235 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 MCEMP1Q8IX19 187 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 PSD4Q8NDX1 1056 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 HUS1BQ8NHY5 278 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 TANKQ92844 425 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 ISL2Q96A47 359 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 ANKRD9Q96BM1 317 aaPredicted RBP23.52■■□□□ 1.36
VEGFA-208ENST00000417285 REPS1Q96D71 796 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 PHF12Q96QT6 1004 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 OR51B5Q9H339 312 aa23.52■■□□□ 1.36
VEGFA-208ENST00000417285 DYRK3O43781 588 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 KRT38O76015 456 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 CLDN14O95500 239 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 RBP1P09455 135 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 PRF1P14222 555 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 CNTFP26441 200 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 ECHS1P30084 290 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 PTGER1P34995 402 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 MAGEA12P43365 314 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 RAP1GDS1P52306 607 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 RNF4P78317 190 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 HSF1Q00613 529 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 GTF2H2Q13888 395 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 TECRLQ5HYJ1 363 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 GTF2H2CQ6P1K8 395 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 PAOXQ6QHF9 649 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 IL20RBQ6UXL0 311 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 GPR180Q86V85 440 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 SRRM1Q8IYB3 904 aaKnown RBP23.51■■□□□ 1.35
VEGFA-208ENST00000417285 KIF18AQ8NI77 898 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 SLC2A12Q8TD20 617 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 RBM18Q96H35 190 aaKnown RBP23.51■■□□□ 1.35
VEGFA-208ENST00000417285 SGCZQ96LD1 299 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 RASL10BQ96S79 203 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 LIN28AQ9H9Z2 209 aaKnown RBP23.51■■□□□ 1.35
VEGFA-208ENST00000417285 PSD3Q9NYI0 1048 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 COPS7AQ9UBW8 275 aa23.51■■□□□ 1.35
VEGFA-208ENST00000417285 PHF11Q9UIL8 331 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms