RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 MS4A12Q9NXJ0 267 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 FBXL12Q9NXK8 326 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 CFAP20Q9Y6A4 193 aaKnown RBP13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 PCDHGA12O60330 932 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 FGF18O76093 207 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 GADD45AP24522 165 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 NRIP1P48552 1158 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 RAB11FIP2Q7L804 512 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF280BQ86YH2 543 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 HYLS1Q96M11 299 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF649Q9BS31 505 aa13.2□□□□□ -0.3
SMARCA4-202ENST00000413806 CAPN14A8MX76 684 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 B8ZZF3 427 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 SHMT2P34897 504 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 TRAM1Q15629 374 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 SSX2Q16385 188 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 SLC9B2Q86UD5 537 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF227Q86WZ6 799 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 ZSWIM9Q86XI8 627 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 TSTD1Q8NFU3 115 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 OR10Q1Q8NGQ4 319 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF675Q8TD23 568 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 SLC25A36Q96CQ1 311 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 DPYSL5Q9BPU6 564 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 TMEM98Q9Y2Y6 226 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 GJB5O95377 273 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 PTTG1O95997 202 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 LMAN2Q12907 356 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 IRF5Q13568 498 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 LY6G5CQ5SRR4 150 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 PM20D1Q6GTS8 502 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 NRROSQ86YC3 692 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 NRSN1Q8IZ57 195 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 PNLDC1Q8NA58 520 aaKnown RBP13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 KCT2Q8NC54 265 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 PSD4Q8NDX1 1056 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 GLYATL1Q969I3 302 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 SSX3Q99909 188 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 CPNE5Q9HCH3 593 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 J3QLW9 94 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 SOX14O95416 240 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 DHRS4L1P0CG22 281 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF19P17023 458 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 CHMP24386 653 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 EVI2BP34910 448 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 MAP2K4P45985 399 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 HLCSP50747 726 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.19□□□□□ -0.35e-10■■■□□ 16.7
SMARCA4-202ENST00000413806 KLHL26Q53HC5 615 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 PIGGQ5H8A4 983 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 TLDC1Q6P9B6 456 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 HSDL2Q6YN16 418 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 HIST1H2AAQ96QV6 131 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 SLC2A11Q9BYW1 496 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 OR51I1Q9H343 314 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 DNAJC27Q9NZQ0 273 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 A0A1B0GVC2 190 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 PSMD9O00233 223 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 OR3A3P47888 321 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 OR3A2P47893 321 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 PTGR1Q14914 329 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 ABCA11PQ4W5N1 156 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 KRTCAP2Q8N6L1 136 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 POGLUT1Q8NBL1 392 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 COQ8BQ96D53 544 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 MARCH4Q9P2E8 410 aaPredicted RBP13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 PCDHGB2Q9Y5G2 931 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 C5P01031 1676 aa13.19□□□□□ -0.3
SMARCA4-202ENST00000413806 B4DGG1 531 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 IFNA21P01568 189 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 MAGEA6P43360 314 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 SLC3A1Q07837 685 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 AIMP2Q13155 320 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 Q6ZVL8 140 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 TMED4Q7Z7H5 227 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 TCEANCQ8N8B7 351 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 C7orf50Q9BRJ6 194 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 UQCC2Q9BRT2 126 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 TMEM185BQ9H7F4 350 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 BIN3Q9NQY0 253 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 PLAGL1Q9UM63 463 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 WDR45Q9Y484 360 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 MYH8P13535 1937 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 ZNF726A6NNF4 738 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 EIF3FO00303 357 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 RPL10P27635 214 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 ATXN7L3Q14CW9 347 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 ABRAXAS2Q15018 415 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 OR4E2Q8NGC2 313 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 OR5T3Q8NGG3 340 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 SETD7Q8WTS6 366 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 SYT11Q9BT88 431 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 TP63Q9H3D4 680 aaPredicted RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 YARS2Q9Y2Z4 477 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 CDH10Q9Y6N8 788 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 LEFTY1O75610 366 aa13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 FARS2O95363 451 aaKnown RBP13.18□□□□□ -0.3
SMARCA4-202ENST00000413806 GBAP04062 536 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms