RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NEUROD4Q9HD90 331 aa8.84□□□□□ -0.99
RFFL-203ENST00000413582 FBXO6Q9NRD1 293 aaPredicted RBP8.84□□□□□ -0.99
RFFL-203ENST00000413582 PNO1Q9NRX1 252 aaKnown RBP8.84□□□□□ -0.99
RFFL-203ENST00000413582 SAMD15Q9P1V8 674 aa8.84□□□□□ -0.99
RFFL-203ENST00000413582 MYOTQ9UBF9 498 aa8.84□□□□□ -0.99
RFFL-203ENST00000413582 ZFP69BQ9UJL9 534 aa8.84□□□□□ -0.99
RFFL-203ENST00000413582 ACAD8Q9UKU7 415 aa8.84□□□□□ -0.99
RFFL-203ENST00000413582 TRGV5A0A0B4J1U4 118 aa8.83□□□□□ -1
RFFL-203ENST00000413582 ATP6AP2A0A1C7CYW4 349 aa8.83□□□□□ -1
RFFL-203ENST00000413582 HSPB2A8KAH6 182 aa8.83□□□□□ -1
RFFL-203ENST00000413582 FAM171A2A8MVW0 826 aa8.83□□□□□ -1
RFFL-203ENST00000413582 WWP2O00308 870 aa8.83□□□□□ -1
RFFL-203ENST00000413582 HCN1O60741 890 aa8.83□□□□□ -1
RFFL-203ENST00000413582 ZNF354AO60765 605 aaPredicted RBP8.83□□□□□ -1
RFFL-203ENST00000413582 ATP6AP2O75787 350 aa8.83□□□□□ -1
RFFL-203ENST00000413582 LY6G6DO95868 133 aa8.83□□□□□ -1
RFFL-203ENST00000413582 C8GP07360 202 aa8.83□□□□□ -1
RFFL-203ENST00000413582 GSTA2P09210 222 aa8.83□□□□□ -1
RFFL-203ENST00000413582 FAM153BP0C7A2 387 aa8.83□□□□□ -1
RFFL-203ENST00000413582 CCL3P10147 92 aa8.83□□□□□ -1
RFFL-203ENST00000413582 PAMP19021 973 aa8.83□□□□□ -1
RFFL-203ENST00000413582 CD53P19397 219 aa8.83□□□□□ -1
RFFL-203ENST00000413582 CNR1P21554 472 aa8.83□□□□□ -1
RFFL-203ENST00000413582 BMP5P22003 454 aa8.83□□□□□ -1
RFFL-203ENST00000413582 AHRP35869 848 aa8.83□□□□□ -1
RFFL-203ENST00000413582 HNF4AP41235 474 aa8.83□□□□□ -1
RFFL-203ENST00000413582 SLC1A2P43004 574 aa8.83□□□□□ -1
RFFL-203ENST00000413582 DNASE1L1P49184 302 aa8.83□□□□□ -1
RFFL-203ENST00000413582 HNRNPFP52597 415 aaKnown RBP8.83□□□□□ -1
RFFL-203ENST00000413582 HK2P52789 917 aa8.83□□□□□ -1
RFFL-203ENST00000413582 REEP5Q00765 189 aa8.83□□□□□ -1
RFFL-203ENST00000413582 PCBP2Q15366 365 aaKnown RBP eCLIP8.83□□□□□ -1
RFFL-203ENST00000413582 HSPB2Q16082 182 aa8.83□□□□□ -1
RFFL-203ENST00000413582 ZNF750Q32MQ0 723 aa8.83□□□□□ -1
RFFL-203ENST00000413582 FAM153CQ494X1 144 aa8.83□□□□□ -1
RFFL-203ENST00000413582 CATSPEREQ5SY80 951 aa8.83□□□□□ -1
RFFL-203ENST00000413582 HECTD2Q5U5R9 776 aa8.83□□□□□ -1
RFFL-203ENST00000413582 CYS1Q717R9 158 aa8.83□□□□□ -1
RFFL-203ENST00000413582 CXXC5Q7LFL8 322 aaKnown RBP8.83□□□□□ -1
RFFL-203ENST00000413582 HDXQ7Z353 690 aa8.83□□□□□ -1
RFFL-203ENST00000413582 CXorf67Q86X51 503 aaPredicted RBP8.83□□□□□ -1
RFFL-203ENST00000413582 ULK2Q8IYT8 1036 aa8.83□□□□□ -1
RFFL-203ENST00000413582 ANKRD53Q8N9V6 530 aa8.83□□□□□ -1
RFFL-203ENST00000413582 GOLM1Q8NBJ4 401 aa8.83□□□□□ -1
RFFL-203ENST00000413582 OR56A3Q8NH54 315 aa8.83□□□□□ -1
RFFL-203ENST00000413582 SREK1Q8WXA9 508 aaKnown RBP8.83□□□□□ -1
RFFL-203ENST00000413582 PYCR2Q96C36 320 aa8.83□□□□□ -1
RFFL-203ENST00000413582 KLHL31Q9H511 634 aa8.83□□□□□ -1
RFFL-203ENST00000413582 LDAHQ9H6V9 325 aa8.83□□□□□ -1
RFFL-203ENST00000413582 ZNF703Q9H7S9 590 aaPredicted RBP8.83□□□□□ -1
RFFL-203ENST00000413582 ZNF395Q9H8N7 513 aaPredicted RBP8.83□□□□□ -1
RFFL-203ENST00000413582 VIPAS39Q9H9C1 493 aa8.83□□□□□ -1
RFFL-203ENST00000413582 PARVBQ9HBI1 364 aa8.83□□□□□ -1
RFFL-203ENST00000413582 ADAP2Q9NPF8 381 aa8.83□□□□□ -1
RFFL-203ENST00000413582 SEMA4BQ9NPR2 832 aaPredicted RBP8.83□□□□□ -1
RFFL-203ENST00000413582 SACM1LQ9NTJ5 587 aa8.83□□□□□ -1
RFFL-203ENST00000413582 BEX4Q9NWD9 120 aaPredicted RBP8.83□□□□□ -1
RFFL-203ENST00000413582 TUBA8Q9NY65 449 aaPredicted RBP8.83□□□□□ -1
RFFL-203ENST00000413582 ATG4BQ9Y4P1 393 aa8.83□□□□□ -1
RFFL-203ENST00000413582 A0A1W2PPR1 153 aa8.82□□□□□ -1
RFFL-203ENST00000413582 SDR42E2A6NKP2 422 aa8.82□□□□□ -1
RFFL-203ENST00000413582 CLCA1A8K7I4 914 aa8.82□□□□□ -1
RFFL-203ENST00000413582 DVL2O14641 736 aa8.82□□□□□ -1
RFFL-203ENST00000413582 BANF1O75531 89 aa8.82□□□□□ -1
RFFL-203ENST00000413582 TTC4O95801 387 aa8.82□□□□□ -1
RFFL-203ENST00000413582 EPXP11678 715 aa8.82□□□□□ -1
RFFL-203ENST00000413582 PCSK6P29122 969 aa8.82□□□□□ -1
RFFL-203ENST00000413582 MAGEA4P43358 317 aa8.82□□□□□ -1
RFFL-203ENST00000413582 TIAL1Q01085 375 aaKnown RBP eCLIP8.82□□□□□ -1
RFFL-203ENST00000413582 SLC10A1Q14973 349 aa8.82□□□□□ -1
RFFL-203ENST00000413582 MSS51Q4VC12 460 aa8.82□□□□□ -1
RFFL-203ENST00000413582 SHEQ5VZ18 495 aa8.82□□□□□ -1
RFFL-203ENST00000413582 FBXW10Q5XX13 1052 aa8.82□□□□□ -1
RFFL-203ENST00000413582 LRRC8EQ6NSJ5 796 aa8.82□□□□□ -1
RFFL-203ENST00000413582 POMZP3Q6PJE2 187 aa8.82□□□□□ -1
RFFL-203ENST00000413582 FAM47EQ6ZV65 393 aa8.82□□□□□ -1
RFFL-203ENST00000413582 FBXW8Q8N3Y1 598 aa8.82□□□□□ -1
RFFL-203ENST00000413582 TBC1D19Q8N5T2 526 aa8.82□□□□□ -1
RFFL-203ENST00000413582 TMEM52Q8NDY8 209 aa8.82□□□□□ -1
RFFL-203ENST00000413582 EEF1AKMT1Q8WVE0 214 aa8.82□□□□□ -1
RFFL-203ENST00000413582 NEIL2Q969S2 332 aa8.82□□□□□ -1
RFFL-203ENST00000413582 ZNF669Q96BR6 464 aaPredicted RBP8.82□□□□□ -1
RFFL-203ENST00000413582 SIGLEC10Q96LC7 697 aa8.82□□□□□ -1
RFFL-203ENST00000413582 WDR83Q9BRX9 315 aaKnown RBP8.82□□□□□ -1
RFFL-203ENST00000413582 ALKBH4Q9NXW9 302 aa8.82□□□□□ -1
RFFL-203ENST00000413582 TRMT6Q9UJA5 497 aaKnown RBP8.82□□□□□ -1
RFFL-203ENST00000413582 FOXD3Q9UJU5 478 aaPredicted RBP8.82□□□□□ -1
RFFL-203ENST00000413582 PCDHGB3Q9Y5G1 929 aa8.82□□□□□ -1
RFFL-203ENST00000413582 COMMD10Q9Y6G5 202 aa8.82□□□□□ -1
RFFL-203ENST00000413582 MED12Q93074 2177 aa8.82□□□□□ -1
RFFL-203ENST00000413582 MXRA5Q9NR99 2828 aa8.81□□□□□ -1
RFFL-203ENST00000413582 ZCWPW2A0A1B0GU75 182 aa8.81□□□□□ -1
RFFL-203ENST00000413582 URADA6NGE7 173 aa8.81□□□□□ -1
RFFL-203ENST00000413582 TUBAL3A6NHL2 446 aa8.81□□□□□ -1
RFFL-203ENST00000413582 LRRC3CA6NJW4 275 aa8.81□□□□□ -1
RFFL-203ENST00000413582 KDM4EB2RXH2 506 aaPredicted RBP8.81□□□□□ -1
RFFL-203ENST00000413582 GOSR1O95249 250 aa8.81□□□□□ -1
RFFL-203ENST00000413582 HRGP04196 525 aa8.81□□□□□ -1
RFFL-203ENST00000413582 SERPINA6P08185 405 aa8.81□□□□□ -1
RFFL-203ENST00000413582 ABHD2P08910 425 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms