RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 SLC6A18Q96N87 628 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 TSSK6Q9BXA6 273 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 TRIM39Q9HCM9 518 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 TXNL4BQ9NX01 149 aaKnown RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 RHCGQ9UBD6 479 aa16.81■□□□□ 0.28
SDCBP-202ENST00000413219 NUFIP1Q9UHK0 495 aaKnown RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 DIMT1Q9UNQ2 313 aaKnown RBP16.81■□□□□ 0.28
SDCBP-202ENST00000413219 ANAPC1Q9H1A4 1944 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 OLFM2O95897 454 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 CPEP16870 476 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 ERP29P30040 261 aaKnown RBP16.8■□□□□ 0.28
SDCBP-202ENST00000413219 CCND3P30281 292 aaPredicted RBP16.8■□□□□ 0.28
SDCBP-202ENST00000413219 XKP51811 444 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 ACLYP53396 1101 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 LIM2P55344 173 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 DCDC1P59894 354 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 DUSP7Q16829 419 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 SYTL3Q4VX76 610 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 MPPE1Q53F39 396 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 SNAP47Q5SQN1 464 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 DDI2Q5TDH0 399 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 TPGS2Q68CL5 300 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 C22orf39Q6P5X5 142 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 ARMCX6Q7L4S7 300 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 IFNL1Q8IU54 200 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 HS6ST3Q8IZP7 471 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 PDXPQ96GD0 296 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 TEFMQ96QE5 360 aaKnown RBP16.8■□□□□ 0.28
SDCBP-202ENST00000413219 SYT17Q9BSW7 474 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 PLEKHB1Q9UF11 243 aaPredicted RBP16.8■□□□□ 0.28
SDCBP-202ENST00000413219 KLHL21Q9UJP4 597 aa16.8■□□□□ 0.28
SDCBP-202ENST00000413219 LSM7Q9UK45 103 aaKnown RBP16.8■□□□□ 0.28
SDCBP-202ENST00000413219 A0A1W2PRB8 838 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 POLR1CO15160 346 aaPredicted RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 TMCC2O75069 709 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 MTX2O75431 263 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 SLC16A8O95907 504 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 DDX5P17844 614 aaKnown RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 UQCRC2P22695 453 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 CPN2P22792 545 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 CD70P32970 193 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 GSTM5P46439 218 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 SLC9A3P48764 834 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 HEPACAMQ14CZ8 416 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 QPRTQ15274 297 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 LEXMQ3ZCV2 418 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 SLC25A30Q5SVS4 291 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 DCST1Q5T197 706 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 OR5AK3PQ8NH89 298 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 JPH3Q8WXH2 748 aaPredicted RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 NEIL2Q969S2 332 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 TMEM159Q96B96 161 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 DIRAS2Q96HU8 199 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 SAMD11Q96NU1 681 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 PKP4Q99569 1192 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 EFCAB11Q9BUY7 163 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 TRAF4Q9BUZ4 470 aaPredicted RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 RPRD1BQ9NQG5 326 aaKnown RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 DMRT3Q9NQL9 472 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 CD84Q9UIB8 345 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 HCN2Q9UL51 889 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 HS3ST2Q9Y278 367 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 KIAA1671Q9BY89 1806 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 LINC00854A0A1B0GVQ3 168 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 A0A1W2PQL4 384 aaPredicted RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 STK25O00506 426 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 NPC1O15118 1278 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 POP4O95707 220 aaKnown RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 SLC10A3P09131 477 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 ZNF30P17039 623 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 ELAVL4P26378 380 aaKnown RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 SOAT1P35610 550 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 DAB2P98082 770 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 MC1RQ01726 317 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 C19orf57Q0VDD7 668 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 HNRNPA0Q13151 305 aaKnown RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 CCSMST1Q4G0I0 132 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 LIPKQ5VXJ0 399 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 SAXO2Q658L1 398 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 PPP2R2DQ66LE6 453 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 IKBIPQ70UQ0 350 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 TMPRSS11BQ86T26 416 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 FAM26EQ8N5C1 309 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 ARL14EPQ8N8R7 260 aaPredicted RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 ZFYVE19Q96K21 471 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 FYTTD1Q96QD9 318 aaKnown RBP16.79■□□□□ 0.28
SDCBP-202ENST00000413219 FAM83DQ9H4H8 585 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 SYNDIG1Q9H7V2 258 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 A4GALTQ9NPC4 353 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 CLEC4EQ9ULY5 219 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 ICKQ9UPZ9 632 aa16.79■□□□□ 0.28
SDCBP-202ENST00000413219 FAM227AF5H4B4 570 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 WWP2O00308 870 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 PLD2O14939 933 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 HCN1O60741 890 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 PDE9AO76083 593 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 RAB36O95755 333 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 HLA-DQB1P01920 261 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 MSL3P1P0C860 447 aa16.78■□□□□ 0.28
SDCBP-202ENST00000413219 BDKRB1P46663 353 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms