RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 AADACL4Q5VUY2 407 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 LIPJQ5W064 366 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 TTC23Q5W5X9 447 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 CCNI2Q6ZMN8 369 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 TMCO2Q7Z6W1 182 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 LHFPL4Q7Z7J7 247 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 PELI3Q8N2H9 469 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 CLIP4Q8N3C7 705 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 PRSS35Q8N3Z0 413 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 LMNTD1Q8N9Z9 388 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 TRMT10AQ8TBZ6 339 aaKnown RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 STARD8Q92502 1023 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 HIST1H2ACQ93077 130 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 PINX1Q96BK5 328 aaKnown RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 IGSF21Q96ID5 467 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 VPS35Q96QK1 796 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 CSF3RQ99062 836 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 NPAS2Q99743 824 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 UBAC1Q9BSL1 405 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 TMEM43Q9BTV4 400 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 PANK2Q9BZ23 570 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 WWP1Q9H0M0 922 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 STMN4Q9H169 189 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-204ENST00000412061 DPEP2Q9H4A9 486 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 EXO5Q9H790 373 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 SLC12A6Q9UHW9 1150 aa4.11□□□□□ -1.75
BRCA1-204ENST00000412061 PARD3Q8TEW0 1356 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 IL16Q14005 1332 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 A0A1W2PRB8 838 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 WRBO00258 174 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 KLF11O14901 512 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 DNAJB6O75190 326 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 BCAS1O75363 584 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 WBP4O75554 376 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 GOT2P00505 430 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 S100A9P06702 114 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 APRTP07741 180 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 RHOXF2BP0C7M4 288 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 ANPEPP15144 967 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF44P15621 663 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 UQCRC2P22695 453 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 TRIM23P36406 574 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 CAPGP40121 348 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 FNTAP49354 379 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 MAZP56270 477 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 ISL1P61371 349 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 RPS18P62269 152 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 RPL23AP62750 156 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 BNC1Q01954 994 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 GABPAQ06546 454 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 BST1Q10588 318 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 TRAP1Q12931 704 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 NFATC2Q13469 925 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 DOC2AQ14183 400 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 TMEM132DQ14C87 1099 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 HEPACAMQ14CZ8 416 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 P2RY14Q15391 338 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 EXOC3L2Q2M3D2 409 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 ITPRIPL2Q3MIP1 535 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF260Q3ZCT1 412 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 TMEM35AQ53FP2 167 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 SNRNP48Q6IEG0 339 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 SLC39A4Q6P5W5 647 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 TRMT1LQ7Z2T5 733 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 C16orf62Q7Z3J2 963 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 CPEB2Q7Z5Q1 589 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 GLCCI1Q86VQ1 547 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 CBWD2Q8IUF1 395 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 FBXL14Q8N1E6 418 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 PGBD5Q8N414 524 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 RNF149Q8NC42 400 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 SLC22A8Q8TCC7 542 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 C3orf30Q96M34 536 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 DEFB118Q96PH6 123 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 MAP3K3Q99759 626 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 RHOXF2Q9BQY4 288 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 MTIF3Q9H2K0 278 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 KCNK13Q9HB14 408 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF701Q9NV72 531 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 ERVK-18Q9QC07 812 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 ZMAT5Q9UDW3 170 aaKnown RBP4.1□□□□□ -1.75
BRCA1-204ENST00000412061 B9D1Q9UPM9 204 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 ETV7Q9Y603 341 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 SLCO1B1Q9Y6L6 691 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 TMEM94Q12767 1356 aa4.1□□□□□ -1.75
BRCA1-204ENST00000412061 MYH14Q7Z406 1995 aaKnown RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 PHLPP2Q6ZVD8 1323 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 FAM240BA0A1B0GVZ2 78 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 NPIPA2E9PIF3 369 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 PPIAL4DF5H284 164 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 ZNF264O43296 627 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 SPOPO43791 374 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 CLDN14O95500 239 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 TXNDC12O95881 172 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 TFAP2AP05549 437 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 CYP11B1P15538 503 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 POLR2CP19387 275 aaPredicted RBP4.09□□□□□ -1.75
BRCA1-204ENST00000412061 GRIA1P42261 906 aa4.09□□□□□ -1.75
BRCA1-204ENST00000412061 ACADSBP45954 432 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms