RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 HK2P52789 917 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 ARFIP1P53367 373 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 PLGLB1Q02325 96 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 DLG1Q12959 904 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 CMPK2Q5EBM0 449 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 KLC3Q6P597 504 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 ZDHHC24Q6UX98 284 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 IL20RBQ6UXL0 311 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 RTL4Q6ZR62 310 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 GK5Q6ZS86 529 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 ZNF572Q7Z3I7 529 aaPredicted RBP13.69□□□□□ -0.22
CBX3-203ENST00000409747 FGD2Q7Z6J4 655 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 CD163Q86VB7 1156 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 GOLM1Q8NBJ4 401 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 SLC2A12Q8TD20 617 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 CA5BP1Q8WTZ4 195 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 RGMAQ96B86 450 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 REPS1Q96D71 796 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 PHF11Q9UIL8 331 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 PCDHGA11Q9Y5H2 935 aa13.69□□□□□ -0.22
CBX3-203ENST00000409747 FBN2P35556 2912 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 WWP2O00308 870 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 RTCAO00442 366 aaKnown RBP13.68□□□□□ -0.22
CBX3-203ENST00000409747 OR6B1O95007 311 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 GFAPP14136 432 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 ELAVL4P26378 380 aaKnown RBP13.68□□□□□ -0.22
CBX3-203ENST00000409747 TLX1P31314 330 aaPredicted RBP13.68□□□□□ -0.22
CBX3-203ENST00000409747 PHBP35232 272 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 SOX3P41225 446 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 RNF4P78317 190 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 PLIN5Q00G26 463 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 CKAP4Q07065 602 aaKnown RBP13.68□□□□□ -0.22
CBX3-203ENST00000409747 GTF3C1Q12789 2109 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 DEPDC1Q5TB30 811 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 LIPJQ5W064 366 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 TMEM211Q6ICI0 200 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 OR4C11Q6IEV9 310 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 OPN5Q6U736 354 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 C16orf47Q6ZP98 133 aaPredicted RBP13.68□□□□□ -0.22
CBX3-203ENST00000409747 SLC22A16Q86VW1 577 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 MYLK4Q86YV6 388 aaPredicted RBP13.68□□□□□ -0.22
CBX3-203ENST00000409747 TEX9Q8N6V9 391 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 OR2M7Q8NG81 312 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 NXNL1Q96CM4 212 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 ART5Q96L15 291 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 SGCZQ96LD1 299 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 DGAT2Q96PD7 388 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 TP63Q9H3D4 680 aaPredicted RBP13.68□□□□□ -0.22
CBX3-203ENST00000409747 RYDENQ9NUL5 291 aaKnown RBP13.68□□□□□ -0.22
CBX3-203ENST00000409747 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.68□□□□□ -0.22
CBX3-203ENST00000409747 TSC22D4Q9Y3Q8 395 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 ADGRG4Q8IZF6 3080 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 DCHS2Q6V1P9 2916 aa13.68□□□□□ -0.22
CBX3-203ENST00000409747 ADAM10O14672 748 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 UGDHO60701 494 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 SNRPB2P08579 225 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 GMPRP36959 345 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 STT3AP46977 705 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 PIK3CGP48736 1102 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 ALDH18A1P54886 795 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 PPIAP62937 165 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 SLAMF1Q13291 335 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 DDX39BQ13838 428 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 SETDB1Q15047 1291 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 ACAP2Q15057 778 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 NDUFAF5Q5TEU4 345 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 C8orf74Q6P047 294 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 SYT10Q6XYQ8 523 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 C3P1Q6ZMU1 363 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 CEP128Q6ZU80 1094 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 CENPLQ8N0S6 344 aaPredicted RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 ZCCHC7Q8N3Z6 543 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 HUS1BQ8NHY5 278 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 KCTD4Q8WVF5 259 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 TANKQ92844 425 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 PELOQ9BRX2 385 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 RPF2Q9H7B2 306 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 ACTR8Q9H981 624 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 LIN28AQ9H9Z2 209 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 DMRT3Q9NQL9 472 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 SNX15Q9NRS6 342 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 TNPO3Q9Y5L0 923 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 PCNX1Q96RV3 2341 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 SAP18O00422 153 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 ZNHIT1O43257 154 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 SH3BGRLO75368 114 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 MTHFD2P13995 350 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 SSTR2P30874 369 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 BUD31P41223 144 aaPredicted RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 SERPINB8P50452 374 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 IGLV3-21P80748 117 aaPredicted RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 TNFRSF17Q02223 184 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 GUCY2DQ02846 1103 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 PFKFB4Q16877 469 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 MROH9Q5TGP6 573 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 METTL2BQ6P1Q9 378 aaKnown RBP13.67□□□□□ -0.22
CBX3-203ENST00000409747 GPR180Q86V85 440 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 NUBPLQ8TB37 319 aa13.67□□□□□ -0.22
CBX3-203ENST00000409747 ASB5Q8WWX0 329 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms