RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 GALNT5Q7Z7M9 940 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 HORMAD2Q8N7B1 307 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 GPBAR1Q8TDU6 330 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 PATE1Q8WXA2 126 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 YTHDF1Q9BYJ9 559 aaKnown RBP19.63■□□□□ 0.73
USP39-203ENST00000409470 PRO3102Q9H379 93 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 LTB4R2Q9NPC1 389 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 TUBA8Q9NY65 449 aaPredicted RBP19.63■□□□□ 0.73
USP39-203ENST00000409470 CA14Q9ULX7 337 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 ATG4BQ9Y4P1 393 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 MDC1Q14676 2089 aaKnown RBP19.63■□□□□ 0.73
USP39-203ENST00000409470 TMEM265A0A087WTH1 108 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 A0A1W2PR48 441 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 OR6C74A6NCV1 312 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 WASHC1A8K0Z3 465 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 C5orf58C9J3I9 102 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 ERAL1O75616 437 aaKnown RBP19.63■□□□□ 0.73
USP39-203ENST00000409470 BMP10O95393 424 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 THEGLP0DJG4 465 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 UGT2B7P16662 529 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 TNFRSF1BP20333 461 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 CCT3P49368 545 aaKnown RBP19.63■□□□□ 0.73
USP39-203ENST00000409470 NCBP2P52298 156 aaKnown RBP eCLIP19.63■□□□□ 0.733e-6■■□□□ 12.2
USP39-203ENST00000409470 RGS1Q08116 209 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 TP53BP2Q13625 1128 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 MLC1Q15049 377 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 IQCCQ4KMZ1 466 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 CRB2Q5IJ48 1285 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 ASPGQ86U10 573 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 TSTD1Q8NFU3 115 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 DGCR14Q96DF8 476 aaKnown RBP19.63■□□□□ 0.73
USP39-203ENST00000409470 NRBF2Q96F24 287 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 OR2A14Q96R47 310 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 GLIPR2Q9H4G4 154 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 LMAN1LQ9HAT1 526 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 C2orf42Q9NWW7 574 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 THUMPD1Q9NXG2 353 aaKnown RBP19.63■□□□□ 0.73
USP39-203ENST00000409470 WSB2Q9NYS7 404 aaPredicted RBP19.63■□□□□ 0.73
USP39-203ENST00000409470 KIF17Q9P2E2 1029 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 RAB23Q9ULC3 237 aa19.63■□□□□ 0.73
USP39-203ENST00000409470 LOC100130705A0A1B0GUX0 176 aa19.62■□□□□ 0.73
USP39-203ENST00000409470 MAGP20916 626 aa19.62■□□□□ 0.73
USP39-203ENST00000409470 CD6P30203 668 aa19.62■□□□□ 0.73
USP39-203ENST00000409470 TSFMP43897 325 aaKnown RBP19.62■□□□□ 0.73
USP39-203ENST00000409470 MRM1Q6IN84 353 aaKnown RBP19.62■□□□□ 0.73
USP39-203ENST00000409470 REEP3Q6NUK4 255 aa19.62■□□□□ 0.73
USP39-203ENST00000409470 SLC44A2Q8IWA5 706 aaPredicted RBP19.62■□□□□ 0.73
USP39-203ENST00000409470 FLVCR1-AS1Q8TAF5 88 aa19.62■□□□□ 0.73
USP39-203ENST00000409470 AMDHD1Q96NU7 426 aa19.62■□□□□ 0.73
USP39-203ENST00000409470 ACTR10Q9NZ32 417 aa19.62■□□□□ 0.73
USP39-203ENST00000409470 CPNE7Q9UBL6 633 aa19.62■□□□□ 0.73
USP39-203ENST00000409470 MITFO75030 526 aaPredicted RBP19.61■□□□□ 0.73
USP39-203ENST00000409470 C9P02748 559 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 ELK4P28324 431 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 RRM2P31350 389 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 OR1E2P47887 323 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 DAPP51397 102 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 PCBP3P57721 371 aaKnown RBP19.61■□□□□ 0.73
USP39-203ENST00000409470 BTN3A2P78410 334 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 EIF2B5Q13144 721 aaKnown RBP19.61■□□□□ 0.73
USP39-203ENST00000409470 LRIT3Q3SXY7 679 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 VN1R4Q7Z5H5 301 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 TAF8Q7Z7C8 310 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 CYP4Z1Q86W10 505 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 KCT2Q8NC54 265 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 A4GALTQ9NPC4 353 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 NDUFAF4Q9P032 175 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 LRP4O75096 1905 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 ARHGEF17Q96PE2 2063 aaPredicted RBP19.61■□□□□ 0.73
USP39-203ENST00000409470 SPTY2D1-AS1A0A0U1RR47 76 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 TRIM64A6NGJ6 449 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 PGRMC2O15173 223 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 DPM1O60762 260 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 B4GALT2O60909 372 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 AIFM1O95831 613 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 BCHEP06276 602 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 CTSEP14091 401 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 PEX19P40855 299 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 YAP1P46937 504 aaKnown RBP19.61■□□□□ 0.73
USP39-203ENST00000409470 ZC3H12BQ5HYM0 836 aaKnown RBP19.61■□□□□ 0.73
USP39-203ENST00000409470 ATG16L2Q8NAA4 619 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 SMYD1Q8NB12 490 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 PSMA8Q8TAA3 256 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 ZFPM2Q8WW38 1151 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 RLN3Q8WXF3 142 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 RAB8BQ92930 207 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 GAL3ST3Q96A11 431 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 EPYCQ99645 322 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 RIBC2Q9H4K1 309 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 POT1Q9NUX5 634 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 ENTPD4Q9Y227 616 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 PCDHGB3Q9Y5G1 929 aa19.61■□□□□ 0.73
USP39-203ENST00000409470 OR2A25A4D2G3 310 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 CELA2BP08218 269 aaPredicted RBP19.6■□□□□ 0.73
USP39-203ENST00000409470 SLC35G6P0C7Q6 338 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 GSTT1P30711 240 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 ALDH3B2P48448 385 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 CYP27C1Q4G0S4 372 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 C18orf63Q68DL7 685 aa19.6■□□□□ 0.73
USP39-203ENST00000409470 FBXO42Q6P3S6 717 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms