RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 NUDT7P0C024 238 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 ZNF10P21506 573 aaPredicted RBP13.29□□□□□ -0.28
GPNMB-203ENST00000409458 PPIBP23284 216 aaKnown RBP13.29□□□□□ -0.28
GPNMB-203ENST00000409458 CD1CP29017 333 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 GCKP35557 465 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 MANFP55145 182 aaKnown RBP13.29□□□□□ -0.28
GPNMB-203ENST00000409458 CASP9P55211 416 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 GPLD1P80108 840 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 DUSP2Q05923 314 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 NR0B2Q15466 257 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 RGNQ15493 299 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 ZNF750Q32MQ0 723 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 COX20Q5RI15 118 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 CPZQ66K79 652 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 ANGPTL8Q6UXH0 198 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 BMP8AQ7Z5Y6 402 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 SPRED1Q7Z699 444 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 RABEPKQ7Z6M1 372 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 PTOV1Q86YD1 416 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 LILRA2Q8N149 483 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 PQLC1Q8N2U9 271 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 ZBED6CLQ96FA7 236 aaPredicted RBP13.29□□□□□ -0.28
GPNMB-203ENST00000409458 PKP2Q99959 881 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 GLIPR2Q9H4G4 154 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 NEUROD4Q9HD90 331 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 ACSS1Q9NUB1 689 aaPredicted RBP13.29□□□□□ -0.28
GPNMB-203ENST00000409458 PHF11Q9UIL8 331 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 RIMS3Q9UJD0 308 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 DAPP1Q9UN19 280 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 CORO2BQ9UQ03 480 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 NAALAD2Q9Y3Q0 740 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 AP4S1Q9Y587 144 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 SNX8Q9Y5X2 465 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 V9GYQ6 96 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 ADAMTS20P59510 1910 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 MN1Q10571 1320 aaPredicted RBP13.29□□□□□ -0.28
GPNMB-203ENST00000409458 CABIN1Q9Y6J0 2220 aa13.29□□□□□ -0.28
GPNMB-203ENST00000409458 GALR3O60755 368 aaPredicted RBP13.28□□□□□ -0.28
GPNMB-203ENST00000409458 KCNK5O95279 499 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 MED26O95402 600 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 UQCRC2P22695 453 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 CPN2P22792 545 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 PSMA4P25789 261 aaKnown RBP13.28□□□□□ -0.28
GPNMB-203ENST00000409458 NTSP30990 170 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 CHI3L1P36222 383 aaPredicted RBP13.28□□□□□ -0.28
GPNMB-203ENST00000409458 BUD31P41223 144 aaPredicted RBP13.28□□□□□ -0.28
GPNMB-203ENST00000409458 MLC1Q15049 377 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 ADRM1Q16186 407 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 GUSBP11Q6P575 273 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 SLC23A3Q6PIS1 610 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 GOLM1Q8NBJ4 401 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 OR5T3Q8NGG3 340 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 OR52N2Q8NGI0 321 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 NCLNQ969V3 563 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 CNRIP1Q96F85 164 aaPredicted RBP13.28□□□□□ -0.28
GPNMB-203ENST00000409458 C10orf90Q96M02 699 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 ZNF285Q96NJ3 590 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 AMDHD1Q96NU7 426 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 CHRNA10Q9GZZ6 450 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 SMOC1Q9H4F8 434 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 EPS8L2Q9H6S3 715 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 GORASP2Q9H8Y8 452 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 PDE7BQ9NP56 450 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 C6orf203Q9P0P8 240 aaPredicted RBP13.28□□□□□ -0.28
GPNMB-203ENST00000409458 SLC6A14Q9UN76 642 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 PLCL2Q9UPR0 1127 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 AURKCQ9UQB9 309 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 SLC22A7Q9Y694 548 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 MYO1GB0I1T2 1018 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 SGK494L7N484 410 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 ARHGAP33O14559 1287 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 SRPX2O60687 465 aaPredicted RBP13.28□□□□□ -0.28
GPNMB-203ENST00000409458 ZBTB11O95625 1053 aaPredicted RBP13.28□□□□□ -0.28
GPNMB-203ENST00000409458 CER1O95813 267 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 GPIP06744 558 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 C8orf89P0DMQ9 161 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 PTGER1P34995 402 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 VHLP40337 213 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 NCBP2P52298 156 aaKnown RBP eCLIP13.28□□□□□ -0.28
GPNMB-203ENST00000409458 KCNAB1Q14722 419 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 C16orf72Q14CZ0 275 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 PERM1Q5SV97 790 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 IRAK1BP1Q5VVH5 260 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 USP53Q70EK8 1073 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 RNF130Q86XS8 419 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 PLXDC1Q8IUK5 500 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 CA13Q8N1Q1 262 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 EID2Q8N6I1 236 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 SUN3Q8TAQ9 357 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 FAM162AQ96A26 154 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 BBS4Q96RK4 519 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 NUDT22Q9BRQ3 303 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 LYRM4Q9HD34 91 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 CCM2LQ9NUG4 571 aaPredicted RBP13.28□□□□□ -0.28
GPNMB-203ENST00000409458 RAPGEFL1Q9UHV5 662 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 ENTPD4Q9Y227 616 aa13.28□□□□□ -0.28
GPNMB-203ENST00000409458 B4GALT2O60909 372 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 RDH16O75452 317 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 GMNNO75496 209 aa13.27□□□□□ -0.29
GPNMB-203ENST00000409458 CREG1O75629 220 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms