RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 CYC1P08574 325 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 ZGLP1P0C6A0 271 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 LINC00032P0C843 101 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 MAPK1P28482 360 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 ARRB2P32121 409 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 GSTM5P46439 218 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 MAPK12P53778 367 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 MAT1AQ00266 395 aaKnown RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 HMGCS1Q01581 520 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 OCRLQ01968 901 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 BTKQ06187 659 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 PDCD2Q16342 344 aaPredicted RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 NKG7Q16617 165 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 ATP6AP1LQ52LC2 224 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 CRTC2Q53ET0 693 aaPredicted RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 CCNYL2Q5T2Q4 361 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 MRPL14Q6P1L8 145 aaKnown RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 COMMD6Q7Z4G1 85 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 UBE3DQ7Z6J8 389 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 WDR75Q8IWA0 830 aaKnown RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 PARP9Q8IXQ6 854 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 C1orf52Q8N6N3 182 aaKnown RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 AMER3Q8N944 861 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 OR5T3Q8NGG3 340 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 OR2Y1Q8NGV0 311 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 PRR7Q8TB68 274 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 PIWIL2Q8TC59 973 aaKnown RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 STT3BQ8TCJ2 826 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 METTL21AQ8WXB1 218 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 NACC2Q96BF6 587 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 PEX11GQ96HA9 241 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 IP6K3Q96PC2 410 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 SORT1Q99523 831 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 CRB3Q9BUF7 120 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 ACTL8Q9H568 366 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 DDX31Q9H8H2 851 aaKnown RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 AKIRIN1Q9H9L7 192 aaPredicted RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 LRTM1Q9HBL6 345 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 TNFRSF12AQ9NP84 129 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 SEMA3GQ9NS98 782 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 SLC22A11Q9NSA0 550 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 C1orf109Q9NX04 203 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 CTSFQ9UBX1 484 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 ERRFI1Q9UJM3 462 aaPredicted RBP9.94□□□□□ -0.82
RPAIN-204ENST00000405578 TCFL5Q9UL49 500 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 TMED5Q9Y3A6 229 aa9.94□□□□□ -0.82
RPAIN-204ENST00000405578 VSTM2BA6NLU5 285 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 HDAC3O15379 428 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 RRP9O43818 475 aaKnown RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 PCDH7O60245 1069 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 SKAP2O75563 359 aaPredicted RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 BMP10O95393 424 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 RECKO95980 971 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 LDLRP01130 860 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 FURINP09958 794 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 FAM58BPP0C7Q3 252 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 CPN2P22792 545 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 F8A1P23610 371 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 PPP2R1BP30154 601 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 BSGP35613 385 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 EMP2P54851 167 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 LIM2P55344 173 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 RAB38P57729 211 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 TRA2BP62995 288 aaKnown RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 OLR1P78380 273 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 TBL3Q12788 808 aaKnown RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 MAD2L1Q13257 205 aaPredicted RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 ERV3-1Q14264 604 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 SSPNQ14714 243 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 SYT16Q17RD7 645 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 UGT3A2Q3SY77 523 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 TUBB8Q3ZCM7 444 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 NADK2Q4G0N4 442 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 PRR30Q53SZ7 412 aaPredicted RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 VWA2Q5GFL6 755 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 LCN10Q6JVE6 187 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 RGS9BPQ6ZS82 235 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 COX15Q7KZN9 410 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 GPR180Q86V85 440 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 RAB43Q86YS6 212 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 ZC3H7AQ8IWR0 971 aaKnown RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 ZNF595Q8IYB9 648 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 PRSS58Q8IYP2 241 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 CA13Q8N1Q1 262 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 DTWD1Q8N5C7 304 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 CHTF18Q8WVB6 975 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 TUBGCP3Q96CW5 907 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 FAIM2Q9BWQ8 316 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 SORBS1Q9BX66 1292 aaKnown RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 C20orf27Q9GZN8 174 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 AICDAQ9GZX7 198 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 SOX17Q9H6I2 414 aaPredicted RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 ZNF395Q9H8N7 513 aaPredicted RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 PNPOQ9NVS9 261 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 MARCOQ9UEW3 520 aaPredicted RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 C19orf25Q9UFG5 118 aaPredicted RBP9.93□□□□□ -0.82
RPAIN-204ENST00000405578 MCM8Q9UJA3 840 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 C3orf18Q9UK00 162 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 FBXW2Q9UKT8 454 aa9.93□□□□□ -0.82
RPAIN-204ENST00000405578 MKL2Q9ULH7 1088 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms