RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 G3BP2Q9UN86 482 aaKnown RBP13.67□□□□□ -0.22
CDPF1-203ENST00000404583 CNTRLQ7Z7A1 2325 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 COL6A6A6NMZ7 2263 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 A0A1W2PR48 441 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 TMEM120BA0PK00 339 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 ARHGAP10A1A4S6 786 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 WASHC1A8K0Z3 465 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 PYCARD-AS1I3L0S3 204 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 BIRC5O15392 142 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 ITGAMP11215 1152 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 PPP2R1BP30154 601 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 TLX1P31314 330 aaPredicted RBP13.66□□□□□ -0.22
CDPF1-203ENST00000404583 BUD31P41223 144 aaPredicted RBP13.66□□□□□ -0.22
CDPF1-203ENST00000404583 PGDP52209 483 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 TNFRSF17Q02223 184 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 ID2Q02363 134 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 NFATC3Q12968 1075 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 CHI3L2Q15782 390 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 BTBD16Q32M84 506 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 AGBL2Q5U5Z8 902 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 ASB18Q6ZVZ8 466 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 PTRH1Q86Y79 214 aaKnown RBP13.66□□□□□ -0.22
CDPF1-203ENST00000404583 OR4N5Q8IXE1 308 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 PPP1R14CQ8TAE6 165 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 AGR3Q8TD06 166 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 ANKRD9Q96BM1 317 aaPredicted RBP13.66□□□□□ -0.22
CDPF1-203ENST00000404583 LPAR4Q99677 370 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 SMAD5Q99717 465 aaKnown RBP13.66□□□□□ -0.22
CDPF1-203ENST00000404583 ALOXE3Q9BYJ1 711 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 RPF2Q9H7B2 306 aaKnown RBP13.66□□□□□ -0.22
CDPF1-203ENST00000404583 EML4Q9HC35 981 aaKnown RBP13.66□□□□□ -0.22
CDPF1-203ENST00000404583 PNO1Q9NRX1 252 aaKnown RBP13.66□□□□□ -0.22
CDPF1-203ENST00000404583 PTGDR2Q9Y5Y4 395 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 ZNF462Q96JM2 2506 aa13.66□□□□□ -0.22
CDPF1-203ENST00000404583 BLACEA4D250 179 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 GLOD5A6NK44 160 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 TMEM233B4DJY2 109 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 ITM2AO43736 263 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 SERPINA7P05543 415 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 FGF4P08620 206 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 NEFHP12036 1026 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 ICAM2P13598 275 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 SERPINB5P36952 375 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 WDR4P57081 412 aaKnown RBP13.65□□□□□ -0.22
CDPF1-203ENST00000404583 RAE1P78406 368 aaKnown RBP13.65□□□□□ -0.22
CDPF1-203ENST00000404583 STX4Q12846 297 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 IMPG1Q17R60 797 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 SPDYAQ5MJ70 313 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 SH2D4BQ5SQS7 431 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 HHATQ5VTY9 493 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 IRAK1BP1Q5VVH5 260 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 PLAG1Q6DJT9 500 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 TRIM46Q7Z4K8 759 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 ZNF605Q86T29 641 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 MGARPQ8TDB4 240 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 BRIX1Q8TDN6 353 aaKnown RBP13.65□□□□□ -0.22
CDPF1-203ENST00000404583 PSMF1Q92530 271 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 ZNF395Q9H8N7 513 aaPredicted RBP13.65□□□□□ -0.22
CDPF1-203ENST00000404583 ZBTB20Q9HC78 741 aaPredicted RBP13.65□□□□□ -0.22
CDPF1-203ENST00000404583 TEX10Q9NXF1 929 aaPredicted RBP13.65□□□□□ -0.22
CDPF1-203ENST00000404583 ZDHHC2Q9UIJ5 367 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 TRAF6Q9Y4K3 522 aa13.65□□□□□ -0.22
CDPF1-203ENST00000404583 PGRMC2O15173 223 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 FGF17O60258 216 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 LYPLA1O75608 230 aaPredicted RBP13.64□□□□□ -0.23
CDPF1-203ENST00000404583 AIFM1O95831 613 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 IFNA16P05015 189 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 NR2F6P10588 404 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 PLA2G2AP14555 144 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 BGNP21810 368 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 MAPK12P53778 367 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 SLC26A5P58743 744 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 FOLH1Q04609 750 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 ACSM2AQ08AH3 577 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 VWA5B1Q5TIE3 1220 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 KANK2Q63ZY3 851 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 ACSM2BQ68CK6 577 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 RIPOR1Q6ZS17 1223 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 CLYBLQ8N0X4 340 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 SIRT6Q8N6T7 355 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 M1APQ8TC57 530 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 TANKQ92844 425 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 TM4SF18Q96CE8 201 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 TUBB1Q9H4B7 451 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 VIPAS39Q9H9C1 493 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 VTI1BQ9UEU0 232 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 ZNF451Q9Y4E5 1061 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 DNAJC15Q9Y5T4 150 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 SAGE2PA6NJ88 616 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 SLC28A1O00337 649 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 PCDH7O60245 1069 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 SASH3O75995 380 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 MYO1DO94832 1006 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 CHEK2O96017 543 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 SERPINE1P05121 402 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 LINC00032P0C843 101 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 SLC18A1P54219 525 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 ABCE1P61221 599 aaKnown RBP13.64□□□□□ -0.23
CDPF1-203ENST00000404583 SERTAD2Q14140 314 aa13.64□□□□□ -0.23
CDPF1-203ENST00000404583 EXT1Q16394 746 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms