RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MIER3Q7Z3K6 550 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 ELMOD2Q8IZ81 293 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 OR52B6Q8NGF0 335 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 RAB39BQ96DA2 213 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 RBM4Q9BWF3 364 aaKnown RBP3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 SLC26A1Q9H2B4 701 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 MED20Q9H944 212 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 MARCH7Q9H992 704 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 SLC25A19Q9HC21 320 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 SOHLH2Q9NX45 425 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 THEGQ9P2T0 379 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 CLIP2Q9UDT6 1046 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 TSPAN16Q9UKR8 245 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 EXOGQ9Y2C4 368 aaKnown RBP3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 ZHX2Q9Y6X8 837 aa3.28□□□□□ -1.88
HMGB1P17-201ENST00000403495 NPC1L1Q9UHC9 1359 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 IGHV3-20A0A0C4DH32 117 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 RNF103-CHMP3A0A140T963 221 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 BICDL2A1A5D9 508 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 ARHGAP42A6NI28 874 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 K7EQD1 137 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 RNF103O00237 685 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 EEF2KO00418 725 aaKnown RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 B3GALNT1O75752 331 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 CEACAM4O75871 244 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 NXPH4O95158 308 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 OR6A2O95222 327 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 FGF19O95750 216 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 PROS1P07225 676 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 SFTPBP07988 381 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 CT45A8P0DMV1 189 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 CT45A9P0DMV2 189 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 GHRP10912 638 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 KRT5P13647 590 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 CYP11B1P15538 503 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 EDNRAP25101 427 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 TRIM23P36406 574 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 TNFRSF4P43489 277 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 CCL11P51671 97 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 CCR4P51679 360 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZNF177Q13360 481 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 TSTA3Q13630 321 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 GCKRQ14397 625 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 EXOSC7Q15024 291 aaKnown RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 TRADDQ15628 312 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 CEBPEQ15744 281 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 KNOP1Q1ED39 458 aaKnown RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 CCDC40Q4G0X9 1142 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 RFTN2Q52LD8 501 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 CT45A2Q5DJT8 189 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 LIPKQ5VXJ0 399 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 NKAIN2Q5VXU1 208 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 RTL6Q6ICC9 239 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 LCLAT1Q6UWP7 414 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 Q6ZRG5 221 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 MCM10Q7L590 875 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 TAF8Q7Z7C8 310 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 ITIH5Q86UX2 942 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 OR4N5Q8IXE1 308 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZNF614Q8N883 585 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 NUP37Q8NFH4 326 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 OR6M1Q8NGM8 313 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 CHURC1Q8WUH1 139 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 COG3Q96JB2 828 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 RPGRIP1Q96KN7 1286 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 NSMCE2Q96MF7 247 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 GPR137Q96N19 417 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 DUX3Q96PT4 197 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 FAM111AQ96PZ2 611 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 TNFRSF13CQ96RJ3 184 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 RAB40CQ96S21 281 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 COQ7Q99807 217 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 ASCL2Q99929 193 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 EGLN1Q9GZT9 426 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 C1orf21Q9H246 121 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 GANQ9H2C0 597 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 HSD3B7Q9H2F3 369 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 MTHFD2LQ9H903 347 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 VIPAS39Q9H9C1 493 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 GDF3Q9NR23 364 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 ACOXLQ9NUZ1 547 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 TEX10Q9NXF1 929 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 TRIM10Q9UDY6 481 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 KCNN3Q9UGI6 736 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZNF346Q9UL40 294 aaKnown RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 PLA2G4CQ9UP65 541 aa3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 MRPS18CQ9Y3D5 142 aaKnown RBP3.27□□□□□ -1.89
HMGB1P17-201ENST00000403495 LOC390937A0A1W2PQ73 354 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 YJEFN3A6XGL0 299 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 TMCO5BA8MYB1 307 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 KIAA0513O60268 411 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 OR6B1O95007 311 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 SYNGR4O95473 234 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 PGK2P07205 417 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 MYOGP15173 224 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 CCNA2P20248 432 aa3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 ZNF10P21506 573 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P17-201ENST00000403495 ACP1P24666 158 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms