RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 IL3P08700 152 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 G6PDP11413 515 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 MAOAP21397 527 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 TRA2BP62995 288 aaKnown RBP14.99□□□□□ -0.01
HMGA1-204ENST00000401473 RHAGQ02094 409 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 TNFRSF17Q02223 184 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 ZNF763Q0D2J5 394 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 PTGR1Q14914 329 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 NXNQ6DKJ4 435 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 OGFOD2Q6N063 350 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 LIX1Q8N485 282 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 CEP70Q8NHQ1 597 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 CLHC1Q8NHS4 586 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 DNAJB14Q8TBM8 379 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 SLC45A3Q96JT2 553 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 TSSK3Q96PN8 268 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 DPH1Q9BZG8 443 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 C5AR2Q9P296 337 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 PHF11Q9UIL8 331 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 KCND3Q9UK17 655 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 CES1P1Q9UKY3 287 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 ZMIZ1Q9ULJ6 1067 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 CACNA1GO43497 2377 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 A0A087WV48 116 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 A0A0G2JND7 137 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 MYO1DO94832 1006 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 TLE3Q04726 772 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 PRSS53Q2L4Q9 553 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 SMU1Q2TAY7 513 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 FAM71E1Q6IPT2 247 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 FAM180BQ6P0A1 224 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 OR4N5Q8IXE1 308 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 AMER2Q8N7J2 671 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 GFM2Q969S9 779 aaKnown RBP14.99□□□□□ -0.01
HMGA1-204ENST00000401473 TCF7L2Q9NQB0 619 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 NECTIN3Q9NQS3 549 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 C14orf105Q9NVL8 296 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 C3orf18Q9UK00 162 aa14.99□□□□□ -0.01
HMGA1-204ENST00000401473 CNTRLQ7Z7A1 2325 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 MYOCOSA0A1B0GUC4 107 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 A0A1W2PS29 197 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 PRMT3O60678 531 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 CREG1O75629 220 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 CD63P08962 238 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 FURINP09958 794 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 ACPPP15309 386 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 BUD31P41223 144 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-204ENST00000401473 EMP2P54851 167 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 C2orf80Q0P641 193 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 IL10RAQ13651 578 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 TUBB8Q3ZCM7 444 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 MFSD4BQ5TF39 518 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 FAAH2Q6GMR7 532 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 ZNF595Q8IYB9 648 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 PLPP5Q8NEB5 264 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 TSLPQ969D9 159 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 KIAA1143Q96AT1 154 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-204ENST00000401473 ANKRD9Q96BM1 317 aaPredicted RBP14.98□□□□□ -0.01
HMGA1-204ENST00000401473 PTCHD1Q96NR3 888 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 CRB3Q9BUF7 120 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 MYNNQ9NPC7 610 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 NOP53Q9NZM5 478 aaKnown RBP14.98□□□□□ -0.01
HMGA1-204ENST00000401473 NXT1Q9UKK6 140 aaKnown RBP14.98□□□□□ -0.01
HMGA1-204ENST00000401473 PCDHA9Q9Y5H5 950 aa14.98□□□□□ -0.01
HMGA1-204ENST00000401473 E9PBE3 544 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 RRP8O43159 456 aaKnown RBP14.97□□□□□ -0.01
HMGA1-204ENST00000401473 FGF17O60258 216 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 KLHL41O60662 606 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 CTNSO60931 367 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 LRATO95237 230 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 NR2F6P10588 404 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 DRD4P21917 467 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 JAK1P23458 1154 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 TLX1P31314 330 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-204ENST00000401473 ID2Q02363 134 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 SSPNQ14714 243 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 SCUBE1Q8IWY4 988 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 TMEM132CQ8N3T6 1108 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 CDC26Q8NHZ8 85 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 STARD8Q92502 1023 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 MARK4Q96L34 752 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 TEX37Q96LM6 180 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 CCNL2Q96S94 520 aaPredicted RBP14.97□□□□□ -0.01
HMGA1-204ENST00000401473 FAM117AQ9C073 453 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 RABEP2Q9H5N1 569 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 ASIC5Q9NY37 505 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 G3BP2Q9UN86 482 aaKnown RBP14.97□□□□□ -0.01
HMGA1-204ENST00000401473 EIF3LQ9Y262 564 aaKnown RBP14.97□□□□□ -0.01
HMGA1-204ENST00000401473 PADI2Q9Y2J8 665 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 SPACA6W5XKT8 324 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 PCSK5Q92824 1860 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 IGKV3D-11A0A0A0MRZ8 115 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 CLDN4O14493 209 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 ANKRD28O15084 1053 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 NKX2-8O15522 239 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 HEXBP07686 556 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 TROVE2P10155 538 aaKnown RBP eCLIP14.97□□□□□ -0.01
HMGA1-204ENST00000401473 PRPS2P11908 318 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 FOLR3P41439 243 aa14.97□□□□□ -0.01
HMGA1-204ENST00000401473 ALDH9A1P49189 494 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms