RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 SOX8P57073 446 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 PHEXP78562 749 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 EEF1A2Q05639 463 aaKnown RBP16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 RUNX2Q13950 521 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 LSM12Q3MHD2 195 aaKnown RBP16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 KHDRBS2Q5VWX1 349 aaKnown RBP16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 TMEM205Q6UW68 189 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 NDUFAF7Q7L592 441 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 CLNKQ7Z7G1 428 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 ZNF605Q86T29 641 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 DDIASQ8IXT1 998 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 CA13Q8N1Q1 262 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 RNF175Q8N4F7 328 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 CDYL2Q8N8U2 506 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 QRFPRQ96P65 431 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 KCNC2Q96PR1 638 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 SERINC2Q96SA4 455 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 MTERF1Q99551 399 aaKnown RBP16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 NPLQ9BXD5 320 aaPredicted RBP16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 OR51B5Q9H339 312 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 WDR55Q9H6Y2 383 aaPredicted RBP16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 COPS7BQ9H9Q2 264 aaPredicted RBP16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 DMRT3Q9NQL9 472 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 SAR1AQ9NR31 198 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 LANCL2Q9NS86 450 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 RIC8BQ9NVN3 520 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 GPR83Q9NYM4 423 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 MED13Q9UHV7 2174 aa16.45■□□□□ 0.22
SMIM11A-202ENST00000399295 LOC102723996A0A087X1L8 192 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 NSG1A0A0A6YYJ2 146 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 A0A1B0GTL3 188 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 A0A1W2PQ72 361 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 PIP5K1BO14986 540 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 SLC22A2O15244 555 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 ATP5HO75947 161 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 HPP00738 406 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 KRT6AP02538 564 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 KRT6BP04259 564 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 JUNP05412 331 aaKnown RBP16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 COX6A1P12074 109 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 PTX3P26022 381 aaPredicted RBP16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 ADSLP30566 484 aaPredicted RBP16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 KRT6CP48668 564 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 RHAGQ02094 409 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 RAPSNQ13702 412 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 DEPDC1Q5TB30 811 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 NXNQ6DKJ4 435 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 ASB18Q6ZVZ8 466 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 UBE3DQ7Z6J8 389 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 PARP9Q8IXQ6 854 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 PLPP5Q8NEB5 264 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 OR52B2Q96RD2 323 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 KCNA7Q96RP8 456 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 CENPKQ9BS16 269 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 TBCDQ9BTW9 1192 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 NUDT9Q9BW91 350 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 ROGDIQ9GZN7 287 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 NMUR2Q9GZQ4 415 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 ZNF160Q9HCG1 818 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 PRDM7Q9NQW5 492 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 C19orf25Q9UFG5 118 aaPredicted RBP16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 ANAPC2Q9UJX6 822 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 SNX6Q9UNH7 406 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 TIMM22Q9Y584 194 aa16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 HEMK1Q9Y5R4 338 aaPredicted RBP16.44■□□□□ 0.22
SMIM11A-202ENST00000399295 IGHV1-45A0A0A0MS14 117 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 MAGEB17A8MXT2 336 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 FAM227AF5H4B4 570 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 SAP18O00422 153 aaKnown RBP16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 RTCAO00442 366 aaKnown RBP16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 ITGA3P26006 1051 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 CERS1P27544 350 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 NEK2P51955 445 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 RPS13P62277 151 aaKnown RBP16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 MYBPC3Q14896 1274 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 KRT72Q14CN4 511 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 ABRAXAS2Q15018 415 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 NSDHLQ15738 373 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 AP5B1Q2VPB7 878 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 GALNTL6Q49A17 601 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 C10orf62Q5T681 223 aaPredicted RBP16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 IRAK1BP1Q5VVH5 260 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 FRG2Q64ET8 278 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 LANCL3Q6ZV70 420 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 LARP4Q71RC2 724 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 PTRH1Q86Y79 214 aaKnown RBP16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 WDR20Q8TBZ3 569 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 RGMAQ96B86 450 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 MTFMTQ96DP5 389 aaKnown RBP16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 FRG2BQ96QU4 278 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 ZNF700Q9H0M5 742 aa16.43■□□□□ 0.22
SMIM11A-202ENST00000399295 IGHV3-20A0A0C4DH32 117 aa16.42■□□□□ 0.22
SMIM11A-202ENST00000399295 SERTM1A2A2V5 107 aa16.42■□□□□ 0.22
SMIM11A-202ENST00000399295 E9PBE3 544 aa16.42■□□□□ 0.22
SMIM11A-202ENST00000399295 SLC28A1O00337 649 aa16.42■□□□□ 0.22
SMIM11A-202ENST00000399295 FOXE1O00358 373 aaPredicted RBP16.42■□□□□ 0.22
SMIM11A-202ENST00000399295 PRMT3O60678 531 aa16.42■□□□□ 0.22
SMIM11A-202ENST00000399295 HNRNPCL1O60812 293 aaKnown RBP16.42■□□□□ 0.22
SMIM11A-202ENST00000399295 ULK1O75385 1050 aa16.42■□□□□ 0.22
SMIM11A-202ENST00000399295 UBOX5O94941 541 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms