RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 MINDY4Q4G0A6 757 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CRTC2Q53ET0 693 aaPredicted RBP11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NDUFAF5Q5TEU4 345 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FAAH2Q6GMR7 532 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 INO80CQ6PI98 192 aaPredicted RBP11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CYP20A1Q6UW02 462 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 LRRC69Q6ZNQ3 347 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 LARP4Q71RC2 724 aaKnown RBP eCLIP11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CLNKQ7Z7G1 428 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MRGPREQ86SM8 312 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 HOMEZQ8IX15 550 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PLPP5Q8NEB5 264 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ADAMTS18Q8TE60 1221 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 C8orf44Q96CB5 159 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TUBGCP3Q96CW5 907 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PPP3R2Q96LZ3 170 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ZNF317Q96PQ6 595 aaPredicted RBP11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 C1orf50Q9BV19 199 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CES1P1Q9UKY3 287 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 USH1CQ9Y6N9 552 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 LOC400499M0QZD8 3231 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PKD1L2Q7Z442 2459 aa11.66□□□□□ -0.54
HLA-DQB1-203ENST00000399082 DSPP15924 2871 aaKnown RBP11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GOLGA8QA0A0J9YX86 632 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MYOCOSA0A1B0GUC4 107 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 A0A1W2PQ72 361 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TCRBV16S1A1N1A0A5B0 115 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GOLGA8OA6NCC3 632 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ZNF891A8MT65 544 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 GOLGA8NF8WBI6 632 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SLCO1B7G3V0H7 640 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PSMD12O00232 456 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 LDB3O75112 727 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ALOX12BO75342 701 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 HEXBP07686 556 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ALDOCP09972 364 aaKnown RBP11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 NR2F6P10588 404 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 BCKDHAP12694 445 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 JAK1P23458 1154 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 EPHA3P29320 983 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 OTX2P32243 289 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 HSD17B7P56937 341 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 TAS2R50P59544 299 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 IGLV3-21P80748 117 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MC1RQ01726 317 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ID2Q02363 134 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ZNF763Q0D2J5 394 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ATP1A4Q13733 1029 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FAM71E1Q6IPT2 247 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 EPGNQ6UW88 154 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 KIRREL2Q6UWL6 708 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 CCDC81Q6ZN84 652 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ANKRD37Q7Z713 158 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 OR4N5Q8IXE1 308 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ZNF595Q8IYB9 648 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 DNAJB14Q8TBM8 379 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SNRNP27Q8WVK2 155 aaKnown RBP11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 OR52B2Q96RD2 323 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 WDR77Q9BQA1 342 aaPredicted RBP11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 EBF4Q9BQW3 602 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MYNNQ9NPC7 610 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PRDM9Q9NQV7 894 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PRTFDC1Q9NRG1 225 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 SEMA3GQ9NS98 782 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 FGFR1OP2Q9NVK5 253 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 RIC8BQ9NVN3 520 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MS4A12Q9NXJ0 267 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 ASIC5Q9NY37 505 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 C5AR2Q9P296 337 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 VTI1BQ9UEU0 232 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 BAIAP2L1Q9UHR4 511 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MMACHCQ9Y4U1 282 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 PCDHA9Q9Y5H5 950 aa11.65□□□□□ -0.54
HLA-DQB1-203ENST00000399082 MGAQ8IWI9 3026 aa11.65□□□□□ -0.55
HLA-DQB1-203ENST00000399082 IGHV3-20A0A0C4DH32 117 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 GNG14A0A1W2PPG7 69 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CDC14CA4D256 554 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PRMT3O60678 531 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CTNSO60931 367 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 CYC1P08574 325 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 C8orf89P0DMQ9 161 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 COX6A1P12074 109 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ACPPP15309 386 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DIO3P55073 304 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 TMPRSS3P57727 454 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 FOLH1Q04609 750 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 EMX2Q04743 252 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 DUSP2Q05923 314 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 VAC14Q08AM6 782 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 PCOLCEQ15113 449 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ZNF750Q32MQ0 723 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 ATP6AP1LQ52LC2 224 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 MFSD4BQ5TF39 518 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 BROXQ5VW32 411 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 IL23RQ5VWK5 629 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 OGFOD2Q6N063 350 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 SLC48A1Q6P1K1 146 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 LRRC34Q8IZ02 419 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 FNDC5Q8NAU1 212 aa11.64□□□□□ -0.55
HLA-DQB1-203ENST00000399082 OR11G2Q8NGC1 345 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms