RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 OR10H3O60404 316 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 POP7O75817 140 aaKnown RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 PIPP12273 146 aaPredicted RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 OSMP13725 252 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 DDCP20711 480 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 PCYT1AP49585 367 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 DGKGP49619 791 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 MAPK12P53778 367 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 MANFP55145 182 aaKnown RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 LIM2P55344 173 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 WDR5P61964 334 aaKnown RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 TP53BP2Q13625 1128 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 PUM1Q14671 1186 aaKnown RBP eCLIP12.47□□□□□ -0.412e-12■□□□□ 10.5
PRAME-201ENST00000398741 KCNJ8Q15842 424 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 ZNF77Q15935 545 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 LRRC26Q2I0M4 334 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 LEXMQ3ZCV2 418 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 DCST1Q5T197 706 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 DESI1Q6ICB0 168 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 SLC9B2Q86UD5 537 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 HORMAD2Q8N7B1 307 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 EFHD2Q96C19 240 aaPredicted RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 PDXPQ96GD0 296 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 TMEM19Q96HH6 336 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 PPP1R16AQ96I34 528 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 TRNT1Q96Q11 434 aaKnown RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 KCNS3Q9BQ31 491 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 ACAT2Q9BWD1 397 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 QPCTLQ9NXS2 382 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 EHD3Q9NZN3 535 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 CRNNQ9UBG3 495 aaPredicted RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 TBX21Q9UL17 535 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 PLAGL1Q9UM63 463 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 CAB39Q9Y376 341 aaPredicted RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 MN1Q10571 1320 aaPredicted RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 H3BN98 237 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 PDPK1O15530 556 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 LZTS3O60299 673 aaPredicted RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 ENTPD6O75354 484 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 PDE9AO76083 593 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 SOX14O95416 240 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 RECKO95980 971 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 SOD1P00441 154 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 SPNP16150 400 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 PTPN2P17706 415 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 CNTN1Q12860 1018 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 NFE2L1Q14494 772 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 SAXO2Q658L1 398 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 ZNF770Q6IQ21 691 aaPredicted RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 LCTLQ6UWM7 567 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 CASP12Q6UXS9 341 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 DEF8Q6ZN54 512 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 VN1R5Q7Z5H4 357 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 ATCAYQ86WG3 371 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 TRIM69Q86WT6 500 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 KRT73Q86Y46 540 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 SLC38A5Q8WUX1 472 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 OR5P2Q8WZ92 322 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 NEURL3Q96EH8 262 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 ZNF514Q96K75 400 aaPredicted RBP12.47□□□□□ -0.41
PRAME-201ENST00000398741 A4GALTQ9NPC4 353 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 MARK1Q9P0L2 795 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 MGAT4BQ9UQ53 548 aa12.47□□□□□ -0.41
PRAME-201ENST00000398741 MYOFQ9NZM1 2061 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 DENND4CQ5VZ89 1909 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 FFAR1O14842 300 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 MOSPD3O75425 235 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 SNX4O95219 450 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 OXSR1O95747 527 aaPredicted RBP12.46□□□□□ -0.41
PRAME-201ENST00000398741 PRNPP04156 253 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 RHOP08100 348 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 ADRA2AP08913 450 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 DDX5P17844 614 aaKnown RBP12.46□□□□□ -0.41
PRAME-201ENST00000398741 CSTF2P33240 577 aaKnown RBP eCLIP12.46□□□□□ -0.41
PRAME-201ENST00000398741 ETV6P41212 452 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 C19orf48Q6RUI8 117 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 CCBE1Q6UXH8 406 aaPredicted RBP12.46□□□□□ -0.41
PRAME-201ENST00000398741 CCDC190Q86UF4 302 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 SLC34A3Q8N130 599 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 VANGL1Q8TAA9 524 aaPredicted RBP12.46□□□□□ -0.41
PRAME-201ENST00000398741 KLHL6Q8WZ60 621 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 RAD51AP1Q96B01 352 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 OPALINQ96PE5 141 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 CNPPD1Q9BV87 410 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 DPEP2Q9H4A9 486 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 NEUROD4Q9HD90 331 aa12.46□□□□□ -0.41
PRAME-201ENST00000398741 C17orf113A0A1B0GUU1 675 aa12.46□□□□□ -0.42
PRAME-201ENST00000398741 RTCAO00442 366 aaKnown RBP12.46□□□□□ -0.42
PRAME-201ENST00000398741 FAAHO00519 579 aa12.46□□□□□ -0.42
PRAME-201ENST00000398741 PLPP1O14494 284 aa12.46□□□□□ -0.42
PRAME-201ENST00000398741 EIF2S1P05198 315 aaKnown RBP12.46□□□□□ -0.42
PRAME-201ENST00000398741 SCG5P05408 212 aa12.46□□□□□ -0.42
PRAME-201ENST00000398741 H1F0P07305 194 aaKnown RBP12.46□□□□□ -0.42
PRAME-201ENST00000398741 KELP23276 732 aa12.46□□□□□ -0.42
PRAME-201ENST00000398741 ELAVL4P26378 380 aaKnown RBP12.46□□□□□ -0.42
PRAME-201ENST00000398741 HOXD12P35452 270 aa12.46□□□□□ -0.42
PRAME-201ENST00000398741 FEN1P39748 380 aaKnown RBP12.46□□□□□ -0.42
PRAME-201ENST00000398741 SLC15A1P46059 708 aa12.46□□□□□ -0.42
PRAME-201ENST00000398741 METAP1P53582 386 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms