RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 SYN3O14994 580 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 SSNA1O43805 119 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 LRATO95237 230 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 APOC3P02656 99 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 CCL5P13501 91 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 AVPR1BP47901 424 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 EVX1P49640 407 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 CXCL17Q6UXB2 119 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 C3P1Q6ZMU1 363 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 GPR155Q7Z3F1 870 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 KIAA0907Q7Z7F0 614 aaPredicted RBP14.38□□□□□ -0.11
CYLD-202ENST00000398568 CHCHD4Q8N4Q1 142 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 PROKR2Q8NFJ6 384 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 SLAMF7Q9NQ25 335 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 TMEM184CQ9NVA4 438 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 LSM2Q9Y333 95 aaKnown RBP14.38□□□□□ -0.11
CYLD-202ENST00000398568 ASB4Q9Y574 426 aa14.38□□□□□ -0.11
CYLD-202ENST00000398568 CPSF4O95639 269 aaKnown RBP14.37□□□□□ -0.11
CYLD-202ENST00000398568 PIRTP0C851 137 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 PCSK2P16519 638 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 STK19P49842 368 aaPredicted RBP14.37□□□□□ -0.11
CYLD-202ENST00000398568 CLDN8P56748 225 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 RPS7P62081 194 aaKnown RBP14.37□□□□□ -0.11
CYLD-202ENST00000398568 RGL4Q8IZJ4 473 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 CARNMT1Q8N4J0 409 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 OR2T4Q8NH00 348 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 MTFMTQ96DP5 389 aaKnown RBP14.37□□□□□ -0.11
CYLD-202ENST00000398568 RPRD1AQ96P16 312 aaPredicted RBP14.37□□□□□ -0.11
CYLD-202ENST00000398568 KLHL5Q96PQ7 755 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 KCNJ15Q99712 375 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 MED18Q9BUE0 208 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 PRR14Q9BWN1 585 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 SORBS1Q9BX66 1292 aaKnown RBP14.37□□□□□ -0.11
CYLD-202ENST00000398568 REG4Q9BYZ8 158 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 DNAJC27Q9NZQ0 273 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 EMC3Q9P0I2 261 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 SCP2D1Q9UJQ7 156 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 LOC105369274A0A096LPK9 316 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 CCDC85CA6NKD9 419 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 FAM170BA6NMN3 283 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 TOXO94900 526 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 B3GALT4O96024 378 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 SRCP12931 536 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 OR4N4Q8N0Y3 316 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 NANOGP1Q8N7R0 232 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 OR9Q2Q8NGE9 314 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 NLNQ9BYT8 704 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 SPRTNQ9H040 489 aaPredicted RBP14.37□□□□□ -0.11
CYLD-202ENST00000398568 KATNBL1Q9H079 304 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 DPAGT1Q9H3H5 408 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 RPL36Q9Y3U8 105 aaKnown RBP14.37□□□□□ -0.11
CYLD-202ENST00000398568 TEX13CA0A0J9YWL9 993 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 PDCD5O14737 125 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 HBP1O60381 514 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 HBQ1P09105 142 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 CXCL3P19876 107 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 SLC6A1P30531 599 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 CTBP2P56545 445 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 KCNJ10P78508 379 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 OPCMLQ14982 345 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 PCBP2Q15366 365 aaKnown RBP eCLIP14.37□□□□□ -0.11
CYLD-202ENST00000398568 ETFDHQ16134 617 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 TAC4Q86UU9 113 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 HGDQ93099 445 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 YIPF5Q969M3 257 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 DOHHQ9BU89 302 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 CXCL16Q9H2A7 254 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 TTYH1Q9H313 450 aaPredicted RBP14.37□□□□□ -0.11
CYLD-202ENST00000398568 AGO3Q9H9G7 860 aaKnown RBP14.37□□□□□ -0.11
CYLD-202ENST00000398568 ERAP1Q9NZ08 941 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 ACTR10Q9NZ32 417 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 PLCL2Q9UPR0 1127 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 CCL27Q9Y4X3 112 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 CACNG2Q9Y698 323 aa14.37□□□□□ -0.11
CYLD-202ENST00000398568 C7orf66A4D0T2 115 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 ODC1P11926 461 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 CYBAP13498 195 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 PKMP14618 531 aaKnown RBP14.36□□□□□ -0.11
CYLD-202ENST00000398568 HSPA7P48741 367 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 CAMK2DQ13557 499 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 FBXO46Q6PJ61 603 aaPredicted RBP14.36□□□□□ -0.11
CYLD-202ENST00000398568 KRT74Q7RTS7 529 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 OR2T35Q8NGX2 323 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 EGFL8Q99944 293 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 AP5M1Q9H0R1 490 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 C11orf16Q9NQ32 467 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 PADI2Q9Y2J8 665 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 NIPSNAP2O75323 286 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 AKR1A1P14550 325 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 KIR3DL1P43629 444 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 GSTM5P46439 218 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 TSPAN5P62079 268 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 NTRK2Q16620 822 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 SLC5A11Q8WWX8 675 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 USP7Q93009 1102 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 SCMH1Q96GD3 660 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 MYO19Q96H55 970 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 GHITMQ9H3K2 345 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 SLCO1C1Q9NYB5 712 aa14.36□□□□□ -0.11
CYLD-202ENST00000398568 KCMF1Q9P0J7 381 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms