RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 GPR135Q8IZ08 494 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 ANKRD27Q96NW4 1050 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 CDC6Q99741 560 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 FANCEQ9HB96 536 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 SLC7A8Q9UHI5 535 aa25.96■■□□□ 1.75
CPNE1-203ENST00000397442 TMEM184BQ9Y519 407 aaPredicted RBP25.96■■□□□ 1.75
CPNE1-203ENST00000397442 AGRPO00253 132 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 ZNF749O43361 778 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 HYAL3O43820 417 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-203ENST00000397442 C6orf47O95873 294 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 HBA1P69905 142 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 C16orf72Q14CZ0 275 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 PIP4P1Q86T03 277 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 HPS6Q86YV9 775 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 FBXW8Q8N3Y1 598 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 NATD1Q8N6N6 113 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 GOT1L1Q8NHS2 421 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-203ENST00000397442 OR6C1Q96RD1 312 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 TRIM4Q9C037 500 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 SLC35C2Q9NQQ7 365 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 ADA2Q9NZK5 511 aa25.95■■□□□ 1.74
CPNE1-203ENST00000397442 A0A1W2PRB8 838 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 PDPK1O15530 556 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 CHST10O43529 356 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 CPSF4O95639 269 aaKnown RBP25.94■■□□□ 1.74
CPNE1-203ENST00000397442 DDX5P17844 614 aaKnown RBP25.94■■□□□ 1.74
CPNE1-203ENST00000397442 SKP1P63208 163 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 SHC2P98077 582 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 SELPLGQ14242 412 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 RUNDC3AQ59EK9 446 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 RNF148Q8N7C7 305 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 FAM13CQ8NE31 585 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 PHF12Q96QT6 1004 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 PRDM9Q9NQV7 894 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 CD300AQ9UGN4 299 aa25.94■■□□□ 1.74
CPNE1-203ENST00000397442 PRORSD1PA6NEY8 169 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 RAB38P57729 211 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 STPG1Q5TH74 334 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 TTLL10Q6ZVT0 673 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 TMEM52Q8NDY8 209 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 OR8J3Q8NGG0 315 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 CNRIP1Q96F85 164 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-203ENST00000397442 AURKBQ96GD4 344 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-203ENST00000397442 IKZF5Q9H5V7 419 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 RPF2Q9H7B2 306 aaKnown RBP25.93■■□□□ 1.74
CPNE1-203ENST00000397442 OCIAD1Q9NX40 245 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 C15orf38-AP3S2A0A0A6YYH1 394 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 A0A1W2PS29 197 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 FAM227AF5H4B4 570 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 H0YIG0 161 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 ZCCHC18P0CG32 403 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 MTPNP58546 118 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 SIM1P81133 766 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-203ENST00000397442 ILKQ13418 452 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 ARPINQ7Z6K5 226 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 METTL27Q8N6F8 245 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-203ENST00000397442 OR4A15Q8NGL6 344 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 MMABQ96EY8 250 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-203ENST00000397442 GBP5Q96PP8 586 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 CLK4Q9HAZ1 481 aaKnown RBP25.93■■□□□ 1.74
CPNE1-203ENST00000397442 TOR4AQ9NXH8 423 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 HCN3Q9P1Z3 774 aa25.93■■□□□ 1.74
CPNE1-203ENST00000397442 GMPR2Q9P2T1 348 aaKnown RBP25.93■■□□□ 1.74
CPNE1-203ENST00000397442 DHCR7Q9UBM7 475 aaKnown RBP25.93■■□□□ 1.74
CPNE1-203ENST00000397442 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-203ENST00000397442 SCN2AQ99250 2005 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 PROB1E7EW31 1015 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 FOXD2O60548 495 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-203ENST00000397442 ANP32DO95626 131 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 C1QCP02747 245 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 TLX1P31314 330 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-203ENST00000397442 AVPR1BP47901 424 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 MAT1AQ00266 395 aaKnown RBP25.92■■□□□ 1.74
CPNE1-203ENST00000397442 DUSP2Q05923 314 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 GAB1Q13480 694 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 CEBPEQ15744 281 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 ZNF750Q32MQ0 723 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 YOD1Q5VVQ6 348 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-203ENST00000397442 OR52E8Q6IFG1 317 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 ZNF621Q6ZSS3 439 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 MVB12AQ96EY5 273 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 ZNF681Q96N22 645 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 NDC1Q9BTX1 674 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 ACSS1Q9NUB1 689 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-203ENST00000397442 TAS2R9Q9NYW1 312 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 SPACA6W5XKT8 324 aa25.92■■□□□ 1.74
CPNE1-203ENST00000397442 MYO1GB0I1T2 1018 aa25.91■■□□□ 1.74
CPNE1-203ENST00000397442 ERAL1O75616 437 aaKnown RBP25.91■■□□□ 1.74
CPNE1-203ENST00000397442 RFPL3O75679 317 aa25.91■■□□□ 1.74
CPNE1-203ENST00000397442 SYT16Q17RD7 645 aa25.91■■□□□ 1.74
CPNE1-203ENST00000397442 SAMD4BQ5PRF9 694 aaKnown RBP25.91■■□□□ 1.74
CPNE1-203ENST00000397442 RBM44Q6ZP01 1051 aaKnown RBP25.91■■□□□ 1.74
CPNE1-203ENST00000397442 ZNF551Q7Z340 670 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-203ENST00000397442 BMPERQ8N8U9 685 aa25.91■■□□□ 1.74
CPNE1-203ENST00000397442 CPPED1Q9BRF8 314 aaPredicted RBP25.91■■□□□ 1.74
CPNE1-203ENST00000397442 TIAF1O95411 115 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 ABCB1P08183 1280 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-203ENST00000397442 CCKBRP32239 447 aa25.9■■□□□ 1.74
CPNE1-203ENST00000397442 CSTF2P33240 577 aaKnown RBP eCLIP25.9■■□□□ 1.742e-45■■■■■ 66.1
CPNE1-203ENST00000397442 ARSFP54793 590 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms