RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 GNAZP19086 355 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 SAT1P21673 171 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 NR0B1P51843 470 aaKnown RBP8.11□□□□□ -1.11
CAPN3-208ENST00000397204 DLX5P56178 289 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 RAB38P57729 211 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 CCZ1BP86790 482 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 CCZ1P86791 482 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-208ENST00000397204 CDKL1Q00532 357 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 EFTUD2Q15029 972 aaKnown RBP eCLIP8.11□□□□□ -1.11
CAPN3-208ENST00000397204 PPP1R3AQ16821 1122 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 ZNF750Q32MQ0 723 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 SLC25A35Q3KQZ1 300 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 FAM45BPQ6NSW5 357 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 ZNF585AQ6P3V2 769 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 SBSNQ6UWP8 590 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 C16orf47Q6ZP98 133 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-208ENST00000397204 RTL4Q6ZR62 310 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 TRILQ7L0X0 811 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 KLHDC8AQ8IYD2 350 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 KRT78Q8N1N4 520 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 NKAPQ8N5F7 415 aaKnown RBP8.11□□□□□ -1.11
CAPN3-208ENST00000397204 GOLM1Q8NBJ4 401 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 OR5L2Q8NGL0 311 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 OR8K3Q8NH51 312 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 ZNF417Q8TAU3 575 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 FAM45AQ8TCE6 357 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 GRK7Q8WTQ7 553 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 PTPMT1Q8WUK0 201 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-208ENST00000397204 KIAA1191Q96A73 305 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 MS4A6EQ96DS6 147 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 RASL10BQ96S79 203 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 ZNF587Q96SQ5 575 aaPredicted RBP8.11□□□□□ -1.11
CAPN3-208ENST00000397204 ALOXE3Q9BYJ1 711 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 TTTY12Q9BZ98 90 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 AICDAQ9GZX7 198 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 NT5DC2Q9H857 520 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 IL1RL2Q9HB29 575 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 VTI1BQ9UEU0 232 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 L3MBTL1Q9Y468 752 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 PCDHGB3Q9Y5G1 929 aa8.11□□□□□ -1.11
CAPN3-208ENST00000397204 A0A0G2JNJ9 132 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 ANKDD1BA6NHY2 528 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 FAM166BA8MTA8 275 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 C4orf51C9J302 202 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 WWP2O00308 870 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 SYT5O00445 386 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 CYR61O00622 381 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 ERI3O43414 337 aaKnown RBP8.1□□□□□ -1.11
CAPN3-208ENST00000397204 HCN1O60741 890 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 P04436 131 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 IFNA16P05015 189 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 GABRA1P14867 456 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 TNNI3P19429 210 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 KLK2P20151 261 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 PPP2R1BP30154 601 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 SOX3P41225 446 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 MAN2A2P49641 1150 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 HK2P52789 917 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 PPP2R2AP63151 447 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 RNF4P78317 190 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 FOXO1Q12778 655 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 TBL3Q12788 808 aaKnown RBP8.1□□□□□ -1.11
CAPN3-208ENST00000397204 ADPRMQ3LIE5 342 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 WLSQ5T9L3 541 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 RNASEH2BQ5TBB1 312 aaKnown RBP8.1□□□□□ -1.11
CAPN3-208ENST00000397204 RTL6Q6ICC9 239 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 OPN5Q6U736 354 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 C8orf86Q6ZUL3 223 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 TMPRSS11BQ86T26 416 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 FAM109AQ8N4B1 249 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 TMEM251Q8N6I4 163 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 TMEM52Q8NDY8 209 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 OR2L5Q8NG80 312 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 OR14A16Q8NHC5 309 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 SARAFQ96BY9 339 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 CERS2Q96G23 380 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 SCYL1Q96KG9 808 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 QRFPRQ96P65 431 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 SERINC2Q96SA4 455 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 POLDIP3Q9BY77 421 aaKnown RBP8.1□□□□□ -1.11
CAPN3-208ENST00000397204 LIN28AQ9H9Z2 209 aaKnown RBP8.1□□□□□ -1.11
CAPN3-208ENST00000397204 PPANQ9NQ55 473 aaKnown RBP8.1□□□□□ -1.11
CAPN3-208ENST00000397204 SACM1LQ9NTJ5 587 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 CCM2LQ9NUG4 571 aaPredicted RBP8.1□□□□□ -1.11
CAPN3-208ENST00000397204 B4GALT7Q9UBV7 327 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 Q9UFV3 132 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 ST6GALNAC2Q9UJ37 374 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 DAPP1Q9UN19 280 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 JRKLQ9Y4A0 524 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 FAM215AQ9Y5M1 114 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 HCFC1P51610 2035 aa8.1□□□□□ -1.11
CAPN3-208ENST00000397204 ATP6AP2A0A1C7CYW4 349 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 ATP6AP2O75787 350 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 SASH3O75995 380 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 DNASE1P24855 282 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 HNRNPH1P31943 449 aaKnown RBP8.09□□□□□ -1.11
CAPN3-208ENST00000397204 MAGEA5P43359 124 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 KIR2DL3P43628 341 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 FNTAP49354 379 aa8.09□□□□□ -1.11
CAPN3-208ENST00000397204 HNRNPFP52597 415 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms