RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 MS4A6EQ96DS6 147 aa13.78□□□□□ -0.2
SEC13-206ENST00000397102 HSPBAP1Q96EW2 488 aa13.78□□□□□ -0.2
SEC13-206ENST00000397102 QRFPRQ96P65 431 aa13.78□□□□□ -0.2
SEC13-206ENST00000397102 ALOXE3Q9BYJ1 711 aa13.78□□□□□ -0.2
SEC13-206ENST00000397102 LRRC3CA6NJW4 275 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 C17orf105B2RV13 164 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 KDM4EB2RXH2 506 aaPredicted RBP13.77□□□□□ -0.21
SEC13-206ENST00000397102 H7C1Q1 480 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 CYR61O00622 381 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 GUCA1CO95843 209 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 HNRNPH1P31943 449 aaKnown RBP13.77□□□□□ -0.21
SEC13-206ENST00000397102 CDKN2DP55273 166 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 WNT3P56703 355 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 IL2P60568 153 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 KCNJ2P63252 427 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 RCN2Q14257 317 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 KCTD19Q17RG1 926 aaPredicted RBP13.77□□□□□ -0.21
SEC13-206ENST00000397102 ZNF791Q3KP31 576 aaPredicted RBP13.77□□□□□ -0.21
SEC13-206ENST00000397102 HSP90AA5PQ58FG0 334 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 PIGGQ5H8A4 983 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 P3H2Q8IVL5 708 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.77□□□□□ -0.215e-6■■■■■ 55.7
SEC13-206ENST00000397102 KLHDC8AQ8IYD2 350 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 CIARTQ8N365 385 aaPredicted RBP13.77□□□□□ -0.21
SEC13-206ENST00000397102 RNF10Q8N5U6 811 aaKnown RBP13.77□□□□□ -0.21
SEC13-206ENST00000397102 C2CD4AQ8NCU7 369 aaPredicted RBP13.77□□□□□ -0.21
SEC13-206ENST00000397102 TTLQ8NG68 377 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 MAIP1Q8WWC4 291 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 CSF3RQ99062 836 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 KIAA1549Q9HCM3 1950 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 XAB2Q9HCS7 855 aaKnown RBP13.77□□□□□ -0.21
SEC13-206ENST00000397102 IARS2Q9NSE4 1012 aaKnown RBP13.77□□□□□ -0.21
SEC13-206ENST00000397102 DAPP1Q9UN19 280 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 KCNE2Q9Y6J6 123 aa13.77□□□□□ -0.21
SEC13-206ENST00000397102 C15orf38-AP3S2A0A0A6YYH1 394 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 MYOCOSA0A1B0GUC4 107 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 A0A1W2PPR1 153 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 LRIT2A6NDA9 550 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 TNNI3P19429 210 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 GSTM2P28161 218 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 TRPC1P48995 793 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 VPS41P49754 854 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 LIM2P55344 173 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 PPP2R2BQ00005 443 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 CRYZQ08257 329 aaKnown RBP13.76□□□□□ -0.21
SEC13-206ENST00000397102 ASPHQ12797 758 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 STX4Q12846 297 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 SERTAD2Q14140 314 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 EFTUD2Q15029 972 aaKnown RBP eCLIP13.76□□□□□ -0.212e-8■■■■■ 42.6
SEC13-206ENST00000397102 POU4F3Q15319 338 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 SF3B4Q15427 424 aaKnown RBP eCLIP13.76□□□□□ -0.211e-7■■□□□ 13.7
SEC13-206ENST00000397102 TRIP13Q15645 432 aaPredicted RBP13.76□□□□□ -0.21
SEC13-206ENST00000397102 RBM20Q5T481 1227 aaKnown RBP13.76□□□□□ -0.21
SEC13-206ENST00000397102 PRAMEF20Q5VT98 475 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 PM20D2Q8IYS1 436 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 MCUQ8NE86 351 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 NUBPLQ8TB37 319 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 SLC22A8Q8TCC7 542 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 SMPDL3BQ92485 455 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 KIAA1191Q96A73 305 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 SPACA9Q96E40 222 aaPredicted RBP13.76□□□□□ -0.21
SEC13-206ENST00000397102 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 SERINC2Q96SA4 455 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 DESI2Q9BSY9 194 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 BDH2Q9BUT1 245 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 EPB41L4BQ9H329 900 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 JKAMPQ9P055 326 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 COPS7AQ9UBW8 275 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 SLC22A14Q9Y267 594 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 DOCK7Q96N67 2140 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 NINQ8N4C6 2090 aa13.76□□□□□ -0.21
SEC13-206ENST00000397102 HIVEP2P31629 2446 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 EEF1E1-BLOC1S5C9J1V9 151 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 EEF1E1O43324 174 aaKnown RBP13.75□□□□□ -0.21
SEC13-206ENST00000397102 CTSSP25774 331 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 PLA2G16P53816 162 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 GPS1Q13098 491 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 DUSP8Q13202 625 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 PDAP1Q13442 181 aaKnown RBP13.75□□□□□ -0.21
SEC13-206ENST00000397102 ADPRMQ3LIE5 342 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 NSUN5P2Q63ZY6 315 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 TRIM40Q6P9F5 258 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 SBSNQ6UWP8 590 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 LYPD8Q6UX82 237 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 TMIGD1Q6UXZ0 262 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 CAPN12Q6ZSI9 719 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 VWA5B2Q8N398 1253 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 RASGEF1CQ8N431 466 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 SLC15A4Q8N697 577 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 OR2L5Q8NG80 312 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 ZNF721Q8TF20 911 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 CCT6BQ92526 530 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 ZNF592Q92610 1267 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 RUNDC3BQ96NL0 473 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 DACH2Q96NX9 599 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 TIMP4Q99727 224 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 PIP5K1AQ99755 562 aa13.75□□□□□ -0.21
SEC13-206ENST00000397102 BAG1Q99933 345 aaPredicted RBP13.75□□□□□ -0.21
SEC13-206ENST00000397102 WDR83Q9BRX9 315 aaKnown RBP13.75□□□□□ -0.21
SEC13-206ENST00000397102 PRDM14Q9GZV8 571 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms