RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 UBE2J1Q9Y385 318 aaPredicted RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 DIP2AQ14689 1571 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 PIGBOS1A0A0B4J2F0 54 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 MYOCOSA0A1B0GUC4 107 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 IGLON5A6NGN9 336 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 NARSO43776 548 aaKnown RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 PPP1R11O60927 126 aaPredicted RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 SOCS5O75159 536 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 IFNA10P01566 189 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 CA3P07451 260 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 CHMP24386 653 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 BMPR1AP36894 532 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 VIPR2P41587 438 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 SOX9P48436 509 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 KCNC1P48547 511 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 PLEKHN1Q494U1 663 aaPredicted RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 OR4K1Q8NGD4 311 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 OR56A3Q8NH54 315 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 TREX2Q9BQ50 279 aaPredicted RBP6.92□□□□□ -1.3
UPF2-203ENST00000397053 EURLQ9NYK6 297 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ZNF318Q5VUA4 2279 aa6.92□□□□□ -1.3
UPF2-203ENST00000397053 ZNF99A8MXY4 864 aaPredicted RBP6.91□□□□□ -1.3
UPF2-203ENST00000397053 GNAO1P09471 354 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 EBLN1P0CF75 366 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 SNHG28P0DPA3 235 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 PRKCAP17252 672 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 EMP2P54851 167 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 ABHD18Q0P651 414 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 DAG1Q14118 895 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 MFSD13AQ14CX5 517 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 HERC3Q15034 1050 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 CST6Q15828 149 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 EXOC3L2Q2M3D2 409 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 C10orf62Q5T681 223 aaPredicted RBP6.91□□□□□ -1.3
UPF2-203ENST00000397053 SH3PXD2AQ5TCZ1 1133 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 LARP4Q71RC2 724 aaKnown RBP eCLIP6.91□□□□□ -1.3
UPF2-203ENST00000397053 CD300LFQ8TDQ1 290 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 SGCZQ96LD1 299 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 NANSQ9NR45 359 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 RAB26Q9ULW5 256 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 ZCCHC11Q5TAX3 1644 aaKnown RBP6.91□□□□□ -1.3
UPF2-203ENST00000397053 A0A1W2PPW3 197 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 TCRBV7S2A1N4TA0A589 114 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 TOR1BO14657 336 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 DFNA5O60443 496 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 GPR143P51810 404 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 OGDHQ02218 1023 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 CHRNEQ04844 493 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 PPP1R8Q12972 351 aaKnown RBP6.91□□□□□ -1.3
UPF2-203ENST00000397053 NPRL3Q12980 569 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 CAMK2DQ13557 499 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 PTPRCAPQ14761 206 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 YTHDF3Q7Z739 585 aaKnown RBP6.91□□□□□ -1.3
UPF2-203ENST00000397053 ILDR1Q86SU0 546 aaPredicted RBP6.91□□□□□ -1.3
UPF2-203ENST00000397053 OR51G2Q8NGK0 314 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 OR9A4Q8NGU2 314 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 TNFRSF25Q93038 417 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 BORCS7Q96B45 105 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 MUCL1Q96DR8 90 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 RBM24Q9BX46 236 aaKnown RBP6.91□□□□□ -1.3
UPF2-203ENST00000397053 DPAGT1Q9H3H5 408 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 PISDQ9UG56 409 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 ABCG2Q9UNQ0 655 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 DLC1Q96QB1 1528 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 MST1RQ04912 1400 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 KLHL33A6NCF5 533 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 MEN1O00255 615 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 EI24O14681 340 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 NPC1O15118 1278 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 LILRB5O75023 590 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 RFPL2O75678 378 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 F2P00734 622 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 MT-ND2P03891 347 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 MSL3P1P0C860 447 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 PET100P0DJ07 73 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 CD79AP11912 226 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 PAX7P23759 505 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 RHEBQ15382 184 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 RSU1Q15404 277 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 KCTD19Q17RG1 926 aaPredicted RBP6.91□□□□□ -1.3
UPF2-203ENST00000397053 PLEKHS1Q5SXH7 462 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 UBE2UQ5VVX9 321 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 TRIM46Q7Z4K8 759 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 GALNT10Q86SR1 603 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 RNF130Q86XS8 419 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 ZNF584Q8IVC4 421 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 RAB39BQ96DA2 213 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 PEX11GQ96HA9 241 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 SLC17A9Q9BYT1 436 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 ACTR6Q9GZN1 396 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 ZIM2Q9NZV7 527 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 ABRACLQ9P1F3 81 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 LIPT1Q9Y234 373 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 KIAA0100Q14667 2235 aaKnown RBP6.91□□□□□ -1.3
UPF2-203ENST00000397053 SLC35F4A4IF30 521 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 A8MT66 165 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 NFKBIEO00221 500 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 TGM5O43548 720 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 TMEM225BP0DP42 221 aa6.91□□□□□ -1.3
UPF2-203ENST00000397053 IL1RNP18510 177 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms