RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 LDAHQ9H6V9 325 aa15□□□□□ -0.01
GNE-202ENST00000396594 MEPEQ9NQ76 525 aaPredicted RBP15□□□□□ -0.01
GNE-202ENST00000396594 PPP4R1LQ9P1A2 415 aa15□□□□□ -0.01
GNE-202ENST00000396594 LAMP5Q9UJQ1 280 aa15□□□□□ -0.01
GNE-202ENST00000396594 CXorf51AA0A1B0GTR3 108 aa15□□□□□ -0.01
GNE-202ENST00000396594 C2orf71A6NGG8 1288 aa15□□□□□ -0.01
GNE-202ENST00000396594 FAM25EA8MYX2 175 aa15□□□□□ -0.01
GNE-202ENST00000396594 OR1I1O60431 355 aa15□□□□□ -0.01
GNE-202ENST00000396594 RETP07949 1114 aa15□□□□□ -0.01
GNE-202ENST00000396594 C5orf46Q6UWT4 87 aa15□□□□□ -0.01
GNE-202ENST00000396594 PDZD3Q86UT5 571 aa15□□□□□ -0.01
GNE-202ENST00000396594 DCBLD1Q8N8Z6 715 aa15□□□□□ -0.01
GNE-202ENST00000396594 CAPSLQ8WWF8 208 aa15□□□□□ -0.01
GNE-202ENST00000396594 SLC25A36Q96CQ1 311 aa15□□□□□ -0.01
GNE-202ENST00000396594 CDK15Q96Q40 435 aa15□□□□□ -0.01
GNE-202ENST00000396594 ETV3P41162 512 aa15□□□□□ -0.01
GNE-202ENST00000396594 OGFOD2Q6N063 350 aa15□□□□□ -0.01
GNE-202ENST00000396594 ABHD12BQ7Z5M8 362 aaPredicted RBP15□□□□□ -0.01
GNE-202ENST00000396594 RNF130Q86XS8 419 aa15□□□□□ -0.01
GNE-202ENST00000396594 PDSS2Q86YH6 399 aa15□□□□□ -0.01
GNE-202ENST00000396594 MS4A15Q8N5U1 240 aa15□□□□□ -0.01
GNE-202ENST00000396594 GAL3ST3Q96A11 431 aa15□□□□□ -0.01
GNE-202ENST00000396594 SGTBQ96EQ0 304 aa15□□□□□ -0.01
GNE-202ENST00000396594 OR51B5Q9H339 312 aa15□□□□□ -0.01
GNE-202ENST00000396594 SLC7A11Q9UPY5 501 aa15□□□□□ -0.01
GNE-202ENST00000396594 C17orf113A0A1B0GUU1 675 aa15□□□□□ -0.01
GNE-202ENST00000396594 HRGP04196 525 aa15□□□□□ -0.01
GNE-202ENST00000396594 SLC35E2BP0CK96 405 aa15□□□□□ -0.01
GNE-202ENST00000396594 XRCC1P18887 633 aaPredicted RBP15□□□□□ -0.01
GNE-202ENST00000396594 TAS2R38P59533 333 aa15□□□□□ -0.01
GNE-202ENST00000396594 PMS2P3Q13401 168 aa15□□□□□ -0.01
GNE-202ENST00000396594 ARFRP1Q13795 201 aa15□□□□□ -0.01
GNE-202ENST00000396594 HNRNPA1L2Q32P51 320 aaKnown RBP15□□□□□ -0.01
GNE-202ENST00000396594 RUNDC3AQ59EK9 446 aa15□□□□□ -0.01
GNE-202ENST00000396594 RTP2Q5QGT7 225 aa15□□□□□ -0.01
GNE-202ENST00000396594 SMARCD3Q6STE5 483 aa15□□□□□ -0.01
GNE-202ENST00000396594 ALDH16A1Q8IZ83 802 aa15□□□□□ -0.01
GNE-202ENST00000396594 POLDIP3Q9BY77 421 aaKnown RBP15□□□□□ -0.01
GNE-202ENST00000396594 TMEM98Q9Y2Y6 226 aa15□□□□□ -0.01
GNE-202ENST00000396594 USP3Q9Y6I4 520 aa15□□□□□ -0.01
GNE-202ENST00000396594 PIAS3Q9Y6X2 628 aa15□□□□□ -0.01
GNE-202ENST00000396594 L7N2F9 121 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 POLR2CP19387 275 aaPredicted RBP14.99□□□□□ -0.01
GNE-202ENST00000396594 VAMP2P63027 116 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 SLC43A2Q8N370 569 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 DDIT4LQ96D03 193 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 TTYH2Q9BSA4 534 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 GTPBP2Q9BX10 602 aaKnown RBP14.99□□□□□ -0.01
GNE-202ENST00000396594 MTMR10Q9NXD2 777 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 PLCH1Q4KWH8 1693 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 COL16A1Q07092 1604 aaPredicted RBP14.99□□□□□ -0.01
GNE-202ENST00000396594 PGAM2P15259 253 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 KIAA0895LQ68EN5 471 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 CNTN4Q8IWV2 1026 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 TOMM5Q8N4H5 51 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 MMABQ96EY8 250 aaPredicted RBP14.99□□□□□ -0.01
GNE-202ENST00000396594 ACTRT3Q9BYD9 372 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 NPIPA2E9PIF3 369 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 NPIPA3F8WFD2 350 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 SRCP12931 536 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 AP2S1P53680 142 aaPredicted RBP14.99□□□□□ -0.01
GNE-202ENST00000396594 ZNF829Q3KNS6 432 aaPredicted RBP14.99□□□□□ -0.01
GNE-202ENST00000396594 EGFLAMQ63HQ2 1017 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 SHFQ7M4L6 423 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 PLPP6Q8IY26 295 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 ZFYVE21Q9BQ24 234 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 MYH6P13533 1939 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 CSTAP01040 98 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 SLC2A2P11168 524 aaPredicted RBP14.99□□□□□ -0.01
GNE-202ENST00000396594 ABRAXAS2Q15018 415 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 MOGQ16653 247 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 MLIPQ5VWP3 458 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 CARM1Q86X55 608 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 CDRT4Q8N9R6 151 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 ELP5Q8TE02 316 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 GRHL3Q8TE85 626 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 FAM3CQ92520 227 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 CASD1Q96PB1 797 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 MS4A4EQ96PG1 132 aa14.99□□□□□ -0.01
GNE-202ENST00000396594 URM1Q9BTM9 101 aaKnown RBP14.99□□□□□ -0.01
GNE-202ENST00000396594 A0A0J9YY10 115 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 MEGF11A6BM72 1044 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 FLRT2O43155 660 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 INMTO95050 263 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 GKN3PP0CG01 181 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 GSTT2P0CG29 244 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 BCKDHAP12694 445 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 FMO3P31513 532 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 ZNF267Q14586 743 aaPredicted RBP14.98□□□□□ -0.01
GNE-202ENST00000396594 MAMDC2Q7Z304 686 aaPredicted RBP14.98□□□□□ -0.01
GNE-202ENST00000396594 C6orf120Q7Z4R8 191 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 VN1R2Q8NFZ6 395 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 CEP76Q8TAP6 659 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 CYP8B1Q9UNU6 501 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 A0A1W2PP55 124 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 CER1O95813 267 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 PDYNP01213 254 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 NANOGP8Q6NSW7 305 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 GDPGP1Q6ZNW5 385 aa14.98□□□□□ -0.01
GNE-202ENST00000396594 KIAA1958Q8N8K9 716 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms