RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 CGREF1Q99674 301 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 YIPF2Q9BWQ6 316 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 SLC35C2Q9NQQ7 365 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 ACSS1Q9NUB1 689 aaPredicted RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 SIDT1Q9NXL6 827 aaKnown RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 TAS2R7Q9NYW3 318 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 HCN3Q9P1Z3 774 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 ZNF282Q9UDV7 671 aaPredicted RBP14.56□□□□□ -0.08
VAMP1-202ENST00000396308 CORO2BQ9UQ03 480 aa14.56□□□□□ -0.08
VAMP1-202ENST00000396308 CACNA1HO95180 2353 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 EVPLLA8MZ36 301 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 POLR1CO15160 346 aaPredicted RBP14.55□□□□□ -0.08
VAMP1-202ENST00000396308 CASC3O15234 703 aaKnown RBP14.55□□□□□ -0.08
VAMP1-202ENST00000396308 CHST10O43529 356 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 GDF9O60383 454 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 DNAJA2O60884 412 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 BMP10O95393 424 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 CTSBP07858 339 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 CD1EP15812 388 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 CSNK2A2P19784 350 aaPredicted RBP14.55□□□□□ -0.08
VAMP1-202ENST00000396308 IL10P22301 178 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 TGM1P22735 817 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 SOAT1P35610 550 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 RAB15P59190 212 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 SPATS1Q496A3 300 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 ZNF385BQ569K4 471 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 LRIF1Q5T3J3 769 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 ARHGAP40Q5TG30 622 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 C18orf63Q68DL7 685 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 B3GNT8Q7Z7M8 397 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 SCUBE1Q8IWY4 988 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 METTL27Q8N6F8 245 aaPredicted RBP14.55□□□□□ -0.08
VAMP1-202ENST00000396308 C7orf57Q8NEG2 295 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 OR4K14Q8NGD5 310 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 OR8J3Q8NGG0 315 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 OR5P2Q8WZ92 322 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 COL26A1Q96A83 441 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 CIDECQ96AQ7 238 aaPredicted RBP14.55□□□□□ -0.08
VAMP1-202ENST00000396308 CLIP3Q96DZ5 547 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 RAD21L1Q9H4I0 556 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 ZNF304Q9HCX3 659 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 SEMA3GQ9NS98 782 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 TAS2R9Q9NYW1 312 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 KCMF1Q9P0J7 381 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 MAP10Q9P2G4 905 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 EXO1Q9UQ84 846 aaKnown RBP14.55□□□□□ -0.08
VAMP1-202ENST00000396308 PCDHB3Q9Y5E6 796 aa14.55□□□□□ -0.08
VAMP1-202ENST00000396308 COL27A1Q8IZC6 1860 aaPredicted RBP14.55□□□□□ -0.08
VAMP1-202ENST00000396308 GLOD5A6NK44 160 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 FOXS1O43638 330 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 CPNE3O75131 537 aaKnown RBP14.54□□□□□ -0.08
VAMP1-202ENST00000396308 C6orf47O95873 294 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 ABCB1P08183 1280 aaPredicted RBP14.54□□□□□ -0.08
VAMP1-202ENST00000396308 FGF5P12034 268 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 MPIP34949 423 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 NCBP2P52298 156 aaKnown RBP eCLIP14.54□□□□□ -0.087e-8■■■■■ 27.5
VAMP1-202ENST00000396308 SLC7A2P52569 658 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 WNT3P56703 355 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 INSM1Q01101 510 aaPredicted RBP14.54□□□□□ -0.08
VAMP1-202ENST00000396308 EIF3IQ13347 325 aaKnown RBP14.54□□□□□ -0.08
VAMP1-202ENST00000396308 DSG2Q14126 1118 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 CAPRIN1Q14444 709 aaKnown RBP14.54□□□□□ -0.08
VAMP1-202ENST00000396308 C16orf72Q14CZ0 275 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 SPDYE7PQ495Y7 208 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.54□□□□□ -0.08
VAMP1-202ENST00000396308 RHBDD2Q6NTF9 364 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 CEACAM20Q6UY09 585 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 ZNF621Q6ZSS3 439 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 ZNF595Q8IYB9 648 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 ULK2Q8IYT8 1036 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 CLECL1Q8IZS7 167 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 MMP21Q8N119 569 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 DEFB124Q8NES8 71 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 OR5T3Q8NGG3 340 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 DNAJB14Q8TBM8 379 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 NETO1Q8TDF5 533 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 OR1F2PQ96R84 312 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 CDRT15Q96T59 188 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 CADM1Q9BY67 442 aaKnown RBP14.54□□□□□ -0.08
VAMP1-202ENST00000396308 DHCR7Q9UBM7 475 aaKnown RBP14.54□□□□□ -0.08
VAMP1-202ENST00000396308 BCAP29Q9UHQ4 241 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 RRP15Q9Y3B9 282 aaKnown RBP14.54□□□□□ -0.08
VAMP1-202ENST00000396308 MAP4K5Q9Y4K4 846 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 PCDHGA7Q9Y5G6 932 aa14.54□□□□□ -0.08
VAMP1-202ENST00000396308 SYNDIG1LA6NDD5 238 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 B4E171 279 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 ANKRD65E5RJM6 399 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 H3BMH7 237 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 FXYD1O00168 92 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 AGRPO00253 132 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 CSO75390 466 aaKnown RBP14.53□□□□□ -0.08
VAMP1-202ENST00000396308 PRKRAO75569 313 aaKnown RBP14.53□□□□□ -0.08
VAMP1-202ENST00000396308 JMJD7P0C870 316 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 ZCCHC18P0CG32 403 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 CHI3L1P36222 383 aaPredicted RBP14.53□□□□□ -0.08
VAMP1-202ENST00000396308 TSPAN7P41732 249 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 KCNJ2P63252 427 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 PHC1P78364 1004 aa14.53□□□□□ -0.08
VAMP1-202ENST00000396308 SIM1P81133 766 aaPredicted RBP14.53□□□□□ -0.08
VAMP1-202ENST00000396308 MC2RQ01718 297 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms