RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ORC5O43913 435 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 SLC2A2P11168 524 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 HLA-EP13747 358 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 IDSP22304 550 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 FEN1P39748 380 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 MC1RQ01726 317 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 TBRG1Q3YBR2 411 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 KLHL12Q53G59 568 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 FRMPD2BQ6IN97 320 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 HTR3DQ70Z44 454 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 HSD11B1LQ7Z5J1 315 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 TMEM19Q96HH6 336 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 WNT6Q9Y6F9 365 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 MGAMO43451 1857 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 DNAH12Q6ZR08 3092 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 PTHP01270 115 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 MASP1P48740 699 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 ELOAQ14241 798 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 TRIM71Q2Q1W2 868 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 CNKSR3Q6P9H4 555 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 SLC16A12Q6ZSM3 486 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 TMEM25Q86YD3 366 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 LYSMD2Q8IV50 215 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 SMPDL3AQ92484 453 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 ZNF689Q96CS4 500 aaPredicted RBP11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 FRMD6Q96NE9 622 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 FCRL4Q96PJ5 515 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 YIPF4Q9BSR8 244 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 DMRT3Q9NQL9 472 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 MRPS7Q9Y2R9 242 aaKnown RBP11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 PMF1-BGLAPU3KQ54 211 aa11.15□□□□□ -0.62
UBE2D3-209ENST00000394804 A8MV72 311 aaPredicted RBP11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 DHFRP00374 187 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 PSKH1P11801 424 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 PRG2P13727 222 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 MAGEA2P43356 314 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 SLC6A12P48065 614 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 IKBIPQ70UQ0 350 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 C6orf120Q7Z4R8 191 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 IQCHQ86VS3 1027 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 TRIM48Q8IWZ4 208 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 METTL4Q8N3J2 472 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 LRIG1Q96JA1 1093 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 NDUFAF4Q9P032 175 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 PLAGL1Q9UM63 463 aa11.15□□□□□ -0.63
UBE2D3-209ENST00000394804 ISM1B1AKI9 464 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 PCDH17O14917 1159 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 AKAP8O43823 692 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 PCCBP05166 539 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 TLX1P31314 330 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 CTSCP53634 463 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 PFN3P60673 137 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 CD83Q01151 205 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 MBTPS1Q14703 1052 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 SLC9A5Q14940 896 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 FXNQ16595 210 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 CLEC12AQ5QGZ9 265 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ATAT1Q5SQI0 421 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 RNF165Q6ZSG1 346 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 MARCH9Q86YJ5 346 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 SYNPOQ8N3V7 929 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ART5Q96L15 291 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 KCNN2Q9H2S1 579 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ZNF334Q9HCZ1 680 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 TRPV5Q9NQA5 729 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 FBXW2Q9UKT8 454 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 KLK4Q9Y5K2 254 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 SMIM30A4D0T7 59 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ADAM23O75077 832 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ALPPP05187 535 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 RB1P06400 928 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 EPHA2P29317 976 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 MTAPQ13126 283 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 SLC5A12Q1EHB4 618 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 BTLAQ7Z6A9 289 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ASCC1Q8N9N2 400 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ZNF671Q8TAW3 534 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ZNF486Q96H40 463 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 IL17FQ96PD4 163 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 GFM1Q96RP9 751 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 C19orf43Q9BQ61 176 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 MYNNQ9NPC7 610 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 SPHK2Q9NRA0 654 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ZSCAN32Q9NX65 697 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ING4Q9UNL4 249 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 FAM170BA6NMN3 283 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 EFCAB14O75071 495 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 CSF2P04141 144 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 NR4A2P43354 598 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 SRP54P61011 504 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 TLE2Q04725 743 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 KIAA0040Q15053 153 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 CXXC5Q7LFL8 322 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 KRT74Q7RTS7 529 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 SETD7Q8WTS6 366 aaKnown RBP11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 SORCS1Q8WY21 1168 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 ING5Q8WYH8 240 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 RHNO1Q9BSD3 238 aa11.14□□□□□ -0.63
UBE2D3-209ENST00000394804 CLEC4MQ9H2X3 399 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms