RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CELF2-AS1Q8N7Q2 184 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 KREMEN2Q8NCW0 462 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 IL17RDQ8NFM7 739 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 SLC38A5Q8WUX1 472 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 UBE2E3Q969T4 207 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 NEURL3Q96EH8 262 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 DTD2Q96FN9 168 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 COQ10AQ96MF6 247 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 SLC30A2Q9BRI3 323 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 A4GALTQ9NPC4 353 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 SPATA7Q9P0W8 599 aa17.94■□□□□ 0.46
CBX1-202ENST00000393408 PRRC2BQ5JSZ5 2229 aaKnown RBP17.94■□□□□ 0.46
CBX1-202ENST00000393408 CSTF2P33240 577 aaKnown RBP eCLIP17.93■□□□□ 0.46
CBX1-202ENST00000393408 ILKQ13418 452 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 CCDC92Q53HC0 331 aaPredicted RBP17.93■□□□□ 0.46
CBX1-202ENST00000393408 ZNF362Q5T0B9 420 aaPredicted RBP17.93■□□□□ 0.46
CBX1-202ENST00000393408 SLX4IPQ5VYV7 408 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 SPATC1Q76KD6 591 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 ANKRD33Q7Z3H0 272 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 SLC9B2Q86UD5 537 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 TRAPPC5Q8IUR0 188 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 HCAR2Q8TDS4 363 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 LRIG1Q96JA1 1093 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 YME1L1Q96TA2 773 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 OR2AG1Q9H205 316 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 C3orf14Q9HBI5 128 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 SMURF1Q9HCE7 757 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 TRAPPC4Q9Y296 219 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 LTBP2Q14767 1821 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 PDZK1P1A8MUH7 402 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 C5orf58C9J3I9 102 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 SSX4O60224 188 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 SEMA7AO75326 666 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 APOA1P02647 267 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 BCHEP06276 602 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 ENDOUP21128 410 aaKnown RBP17.93■□□□□ 0.46
CBX1-202ENST00000393408 CD72P21854 359 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 TNFSF8P32971 234 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 FEN1P39748 380 aaKnown RBP17.93■□□□□ 0.46
CBX1-202ENST00000393408 MEDAGQ5VYS4 303 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 TNFAIP8L2Q6P589 184 aaPredicted RBP17.93■□□□□ 0.46
CBX1-202ENST00000393408 TMIGD1Q6UXZ0 262 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 ZNF366Q8N895 744 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 ZNF513Q8N8E2 541 aaPredicted RBP17.93■□□□□ 0.46
CBX1-202ENST00000393408 FLCNQ8NFG4 579 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 CEP19Q96LK0 163 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 CNPPD1Q9BV87 410 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 ASPNQ9BXN1 380 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 SLAMF7Q9NQ25 335 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 CREBZFQ9NS37 354 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 ERVK13-1Q9NX77 482 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 CLEC2DQ9UHP7 191 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 TMCC3Q9ULS5 477 aa17.93■□□□□ 0.46
CBX1-202ENST00000393408 NUP210Q8TEM1 1887 aaPredicted RBP17.93■□□□□ 0.46
CBX1-202ENST00000393408 PSMD11O00231 422 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 MFN2O95140 757 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 IGFBP1P08833 259 aaPredicted RBP17.92■□□□□ 0.46
CBX1-202ENST00000393408 ELAVL4P26378 380 aaKnown RBP17.92■□□□□ 0.46
CBX1-202ENST00000393408 OPRD1P41143 372 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 DGKGP49619 791 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 TEAD2Q15562 447 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 FAM92BQ6ZTR7 304 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 TRMT11Q7Z4G4 463 aaKnown RBP17.92■□□□□ 0.46
CBX1-202ENST00000393408 KLHL6Q8WZ60 621 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 TMEM19Q96HH6 336 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 SIAEQ9HAT2 523 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 TDP1Q9NUW8 608 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 C14orf119Q9NWQ9 140 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 DNAJC27Q9NZQ0 273 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 MGAT4BQ9UQ53 548 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 CARNS1A5YM72 827 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 H3BQ06 376 aaPredicted RBP17.92■□□□□ 0.46
CBX1-202ENST00000393408 K7ESM1 405 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 SPINT1O43278 529 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 CSO75390 466 aaKnown RBP17.92■□□□□ 0.46
CBX1-202ENST00000393408 SOX14O95416 240 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 GNRH1P01148 92 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 CKMT1AP12532 417 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 TIE1P35590 1138 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 RPS19P39019 145 aaKnown RBP17.92■□□□□ 0.46
CBX1-202ENST00000393408 SOX3P41225 446 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 NKX2-5P52952 324 aaPredicted RBP17.92■□□□□ 0.46
CBX1-202ENST00000393408 C12orf73Q69YU5 71 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 TCTN3Q6NUS6 607 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 ADGRF3Q8IZF5 1079 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 SETD7Q8WTS6 366 aaKnown RBP17.92■□□□□ 0.46
CBX1-202ENST00000393408 DHRS1Q96LJ7 313 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 BARHL1Q9BZE3 327 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 DYRK4Q9NR20 520 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 KLHL3Q9UH77 587 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 TBC1D24Q9ULP9 559 aa17.92■□□□□ 0.46
CBX1-202ENST00000393408 DDCP20711 480 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 ACADLP28330 430 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 PPM1AP35813 382 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 PRAMEF14Q5SWL7 426 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 AGAP6Q5VW22 663 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 PRAMEF13Q5VWM6 474 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 WDR53Q7Z5U6 358 aaPredicted RBP17.91■□□□□ 0.46
CBX1-202ENST00000393408 KRT73Q86Y46 540 aa17.91■□□□□ 0.46
CBX1-202ENST00000393408 OR5P2Q8WZ92 322 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms