RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 ZNF235Q14590 738 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 FAM171A1Q5VUB5 890 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 STEAP4Q687X5 459 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 POMZP3Q6PJE2 187 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 SCN4BQ8IWT1 228 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 OR10G2Q8NGC3 310 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 OR5B17Q8NGF7 314 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 DNAJB3Q8WWF6 145 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 UBE2FQ969M7 185 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 KIAA1143Q96AT1 154 aaPredicted RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 CXorf58Q96LI9 332 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 OR4K3Q96R72 315 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 H2AFJQ9BTM1 129 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM43Q9BTV4 400 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 NTMT1Q9BV86 223 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 NIFKQ9BYG3 293 aaKnown RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 SLC38A1Q9H2H9 487 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 GLOD4Q9HC38 313 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 WWOXQ9NZC7 414 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 RPL36Q9Y3U8 105 aaKnown RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 PCDHA9Q9Y5H5 950 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 RRN3P2A6NIE6 340 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 ARVCFO00192 962 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 CYTIPO60759 359 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 SLC19A2O60779 497 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 EEDO75530 441 aaKnown RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 REM1O75628 298 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 GIFP27352 417 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 NMBRP28336 390 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 AQP1P29972 269 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 GCGRP47871 477 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 SULT1E1P49888 294 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 GPR143P51810 404 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 CDH4P55283 916 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 AP3S2P59780 193 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 PTPN11Q06124 597 aaPredicted RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 AKR1C8PQ5T2L2 129 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 TMEM145Q8NBT3 493 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 OR2T11Q8NH01 316 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 MFSD14AQ96MC6 490 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 HBEGFQ99075 208 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 CCM2Q9BSQ5 444 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 TOLLIPQ9H0E2 274 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 TXNRD2Q9NNW7 524 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 FLRT1Q9NZU1 646 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 ZIM2Q9NZV7 527 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 RCOR3Q9P2K3 495 aaPredicted RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 PTGDR2Q9Y5Y4 395 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 H7C0S8 307 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 ACKR2O00590 384 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 CHP2O43745 196 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 SIX3O95343 332 aaPredicted RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 VNN2O95498 520 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 MLYCDO95822 493 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 UGT2B7P16662 529 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 EFNA1P20827 205 aaPredicted RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 EIF2S3P41091 472 aaKnown RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 OMPP47874 163 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 AKR1C2P52895 323 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 LIMK1P53667 647 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 CDH12P55289 794 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 AKR1C1Q04828 323 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 LCP2Q13094 533 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 FAM174BQ3ZCQ3 159 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 FBXO48Q5FWF7 155 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 GPR158Q5T848 1215 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 EEF1DP3Q658K8 133 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 NOTUMQ6P988 496 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 GPRIN3Q6ZVF9 776 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 HSD17B13Q7Z5P4 300 aaPredicted RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 PTRH1Q86Y79 214 aaKnown RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 FUNDC1Q8IVP5 155 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 PELI3Q8N2H9 469 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 PQLC3Q8N755 202 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 DCBLD1Q8N8Z6 715 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 CAMKVQ8NCB2 501 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 YIPF4Q9BSR8 244 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 THAP7Q9BT49 309 aaPredicted RBP7.32□□□□□ -1.24
VTI1A-201ENST00000393077 DPH7Q9BTV6 452 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 SUCNR1Q9BXA5 334 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 CD244Q9BZW8 370 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF350Q9GZX5 532 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 MFFQ9GZY8 342 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 C11orf49Q9H6J7 331 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 RPS10P5Q9NQ39 176 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 RBPJLQ9UBG7 517 aa7.32□□□□□ -1.24
VTI1A-201ENST00000393077 URADA6NGE7 173 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 ZNF729A6NN14 1252 aaPredicted RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SLC31A2O15432 143 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PIP5K1CO60331 668 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 CDC123O75794 336 aaPredicted RBP7.31□□□□□ -1.24
VTI1A-201ENST00000393077 LPLP06858 475 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 NQO2P16083 231 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PTGFRP43088 359 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PPT1P50897 306 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 SPCS3P61009 180 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 PITPNAQ00169 270 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 MBTD1Q05BQ5 628 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 NKAPLQ5M9Q1 402 aa7.31□□□□□ -1.24
VTI1A-201ENST00000393077 OLFML2AQ68BL7 652 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms