RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 NPLOC4Q8TAT6 608 aa16.28■□□□□ 0.2
TRAF3IP1-202ENST00000391993 TMEM159Q96B96 161 aa16.28■□□□□ 0.2
TRAF3IP1-202ENST00000391993 CPPED1Q9BRF8 314 aaPredicted RBP16.28■□□□□ 0.2
TRAF3IP1-202ENST00000391993 ACPTQ9BZG2 426 aa16.28■□□□□ 0.2
TRAF3IP1-202ENST00000391993 NIPAL2Q9H841 368 aa16.28■□□□□ 0.2
TRAF3IP1-202ENST00000391993 SLC6A14Q9UN76 642 aa16.28■□□□□ 0.2
TRAF3IP1-202ENST00000391993 FMO6PO60774 539 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 RGS11O94810 467 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 SRPRAP08240 638 aaKnown RBP16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 TPMTP51580 245 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 PSMA6P60900 246 aaKnown RBP16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 ZNF730Q6ZMV8 503 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 ANKS3Q6ZW76 656 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 OR51G2Q8NGK0 314 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 RPLP0P6Q8NHW5 317 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 PIRO00625 290 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 PAHP00439 452 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 C1QCP02747 245 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 OR56A5P0C7T3 313 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 SMIM10L2AP0DMW4 78 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 SMIM10L2BP0DMW5 78 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 EPHA5P54756 1037 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 TAF1AQ15573 450 aaPredicted RBP16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 GRK1Q15835 563 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 FKBP1CQ5VVH2 108 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 ESX1Q8N693 406 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 PEX13Q92968 403 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 RELTQ969Z4 430 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 TEFMQ96QE5 360 aaKnown RBP16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 TRAF4Q9BUZ4 470 aaPredicted RBP16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 NTMT1Q9BV86 223 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 C3orf14Q9HBI5 128 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 HRH3Q9Y5N1 445 aa16.27■□□□□ 0.2
TRAF3IP1-202ENST00000391993 RD3LP0DJH9 198 aa16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 GLULP15104 373 aa16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 ADRA1AP35348 466 aa16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 THPOP40225 353 aa16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 CCR6P51684 374 aa16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 MEF2AQ02078 507 aaPredicted RBP16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 IL10RBQ08334 325 aa16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 MAP4K2Q12851 820 aa16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 ANXA8L1Q5VT79 327 aa16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 C8orf82Q6P1X6 216 aaPredicted RBP16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 OXR1Q8N573 874 aa16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 GEMIN6Q8WXD5 167 aaKnown RBP16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 COL26A1Q96A83 441 aa16.27■□□□□ 0.19
TRAF3IP1-202ENST00000391993 COL14A1Q05707 1796 aaKnown RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 DISC1C4P0D8 188 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 MUSKO15146 869 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 MT-ND4P03905 459 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 HLA-DPB1P04440 258 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 H2AFB2P0C5Z0 115 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 F8A1P23610 371 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 CHMP24386 653 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 TAS2R41P59536 307 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 SCAPQ12770 1279 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 RPS26P11Q5JNZ5 115 aaPredicted RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 KCTD20Q7Z5Y7 419 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 IQCHQ86VS3 1027 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 NPAS3Q8IXF0 933 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 TSNAXQ99598 290 aaKnown RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 THAP7Q9BT49 309 aaPredicted RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 OR51B5Q9H339 312 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 ZFP37Q9Y6Q3 630 aaPredicted RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 A0A0G2JMP0 313 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 PRRG1O14668 218 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 PDCD5O14737 125 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 H1F0P07305 194 aaKnown RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 ACVR1BP36896 505 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 MAP2K6P52564 334 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 CDH11P55287 796 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 ZNF91Q05481 1191 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 MON1AQ86VX9 555 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 CFAP206Q8IYR0 622 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 DCLRE1CQ96SD1 692 aaKnown RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 BRD9Q9H8M2 597 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 DERAQ9Y315 318 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 OR10H1Q9Y4A9 318 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 SNX11Q9Y5W9 270 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 ANKRD66B4E2M5 251 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 SIGLEC5O15389 551 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 ALPPL2P10696 532 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 M6PRP20645 277 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 PPIBP23284 216 aaKnown RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 HOXA11P31270 313 aaPredicted RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 CACNG1Q06432 222 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 SIGLEC14Q08ET2 396 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 MS4A13Q5J8X5 152 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 ZBTB37Q5TC79 503 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 CEACAM20Q6UY09 585 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 RTL4Q6ZR62 310 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 TRMT11Q7Z4G4 463 aaKnown RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 ZNF768Q9H5H4 540 aaKnown RBP16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 HPF1Q9NWY4 346 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 KLHL21Q9UJP4 597 aa16.26■□□□□ 0.19
TRAF3IP1-202ENST00000391993 GLYATL1P3A0A0U1RQE8 302 aa16.25■□□□□ 0.19
TRAF3IP1-202ENST00000391993 ZBTB42B2RXF5 422 aa16.25■□□□□ 0.19
TRAF3IP1-202ENST00000391993 PDHXO00330 501 aa16.25■□□□□ 0.19
TRAF3IP1-202ENST00000391993 OR7A17O14581 309 aa16.25■□□□□ 0.19
TRAF3IP1-202ENST00000391993 MRPL3P09001 348 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms