RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 SUSD4Q5VX71 490 aa-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 TCEAL6Q6IPX3 200 aa-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 COX8CQ7Z4L0 72 aa-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 ESX1Q8N693 406 aa-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 CCDC26Q8TAB7 109 aa-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 RDH5Q92781 318 aa-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 NXNL1Q96CM4 212 aa-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 OSBPL11Q9BXB4 747 aa-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 WASH6PQ9NQA3 447 aa-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 SLC35C2Q9NQQ7 365 aa-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 NOL12Q9UGY1 213 aaKnown RBP eCLIP-0.04□□□□□ -2.42
SNORA40-201ENST00000388090 A0A096LNJ9 63 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 GPR75-ASB3A0A0A6YYF3 556 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 OR5H15A6NDH6 313 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 NBR2O15453 112 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 RIPK2O43353 540 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 RNASEH2AO75792 299 aaKnown RBP-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 PPP2R1BP30154 601 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 LONP1P36776 959 aaKnown RBP-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 CTRLP40313 264 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 ZNF75DP51815 510 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 TAF9Q16594 264 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 KRTAP21-3Q3LHN1 58 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 WDR25Q64LD2 544 aaPredicted RBP-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 C15orf52Q6ZUT6 534 aaKnown RBP-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 PIGWQ7Z7B1 504 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 NAA40Q86UY6 237 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 NLRP14Q86W24 1093 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 MFN1Q8IWA4 741 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 OR2L8Q8NGY9 312 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 CRYGNQ8WXF5 182 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 ATL1Q8WXF7 558 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 CCDC34Q96HJ3 373 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 GLIPR2Q9H4G4 154 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 MRGBPQ9NV56 204 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 TXNDC16Q9P2K2 825 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 DPM3Q9P2X0 92 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 RUSC2Q8N2Y8 1516 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 SHROOM3Q8TF72 1996 aa-0.05□□□□□ -2.42
SNORA40-201ENST00000388090 COL5A3P25940 1745 aaPredicted RBP-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 LOC102723996A0A087X1L8 192 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 A0A1W2PPM1 405 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 OR2A25A4D2G3 310 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 RNF212BA8MTL3 300 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 ZNF878C9JN71 531 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 NEDD8-MDP1E9PL57 170 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 ABCD4O14678 606 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 ADAMDEC1O15204 470 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 NPHP1O15259 732 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 MMP1P03956 469 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 FHP07954 510 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 MRPL3P09001 348 aaKnown RBP-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 SP9P0CG40 484 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 ADRA2CP18825 462 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 GABRR1P24046 479 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 PPP2R1AP30153 589 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 GARSP41250 739 aaKnown RBP-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 RPS9P46781 194 aaKnown RBP-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 ARHGDIAP52565 204 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 NUP107P57740 925 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 POLR2LP62875 67 aaKnown RBP-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 CNTN1Q12860 1018 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 IRF3Q14653 427 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 TSTQ16762 297 aaKnown RBP-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 ABCA11PQ4W5N1 156 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 HSP90AB2PQ58FF8 381 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 ZNF311Q5JNZ3 666 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 SPIN3Q5JUX0 258 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 FAM219BQ5XKK7 198 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 SLC27A4Q6P1M0 643 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 TTC27Q6P3X3 843 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 PRUNE1Q86TP1 453 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 PRSS35Q8N3Z0 413 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 GUF1Q8N442 669 aaKnown RBP-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 SAMD3Q8N6K7 520 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 OR10S1Q8NGN2 331 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 LPGAT1Q92604 370 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 PGM2Q96G03 612 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 PAFAH2Q99487 392 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 IARS2Q9NSE4 1012 aaKnown RBP-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 PSD3Q9NYI0 1048 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 CPSF3Q9UKF6 684 aaKnown RBP-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 PCM1Q15154 2024 aa-0.06□□□□□ -2.42
SNORA40-201ENST00000388090 A6NDX4 124 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 TMCO5BA8MYB1 307 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 PRB4P10163 310 aaPredicted RBP-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 LAMP2P13473 410 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 CCNCP24863 283 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 ID1P41134 155 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 KIR3DL2P43630 455 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 LHX2P50458 406 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 ASCL1P50553 236 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 MEF2CQ06413 473 aaPredicted RBP-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 BIRC3Q13489 604 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 PTGISQ16647 500 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 ODF2Q5BJF6 829 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 C10orf62Q5T681 223 aaPredicted RBP-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 GALNT17Q6IS24 598 aa-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 NAA16Q6N069 864 aaPredicted RBP-0.07□□□□□ -2.42
SNORA40-201ENST00000388090 MFSD7Q6UXD7 560 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms