RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PCDHGA11Q9Y5H2 935 aa12.07□□□□□ -0.48
RPAIN-202ENST00000381208 SUPT3HB4E1H0 165 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 TGFBR3LH3BV60 316 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 FANCGO15287 622 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 UGDHO60701 494 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 SUPT3HO75486 399 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 OR2J2O76002 312 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 WISP2O76076 250 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 PRF1P14222 555 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 EPORP19235 508 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 ELAVL4P26378 380 aaKnown RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 GRNP28799 593 aaKnown RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 SSTR2P30874 369 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 TLX1P31314 330 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 SSR2P43308 183 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 PIK3CGP48736 1102 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 ETF1P62495 437 aaKnown RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 MRPS25P82663 173 aaKnown RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 C2orf54Q08AI8 447 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 FBXO48Q5FWF7 155 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 DEPDC1Q5TB30 811 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 NDUFAF5Q5TEU4 345 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 KHDRBS2Q5VWX1 349 aaKnown RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 LIPJQ5W064 366 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 GRHL2Q6ISB3 625 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 KLC3Q6P597 504 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 OPN5Q6U736 354 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 RTL4Q6ZR62 310 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 GK5Q6ZS86 529 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 CLNKQ7Z7G1 428 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 SLC22A16Q86VW1 577 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 CHERPQ8IWX8 916 aaKnown RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 TMEM52Q8NDY8 209 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 OR7G3Q8NG95 312 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 FBF1Q8TES7 1133 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 PTPMT1Q8WUK0 201 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 ASB5Q8WWX0 329 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 EXT2Q93063 718 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 RGMAQ96B86 450 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 RASL10BQ96S79 203 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 DMRTA2Q96SC8 542 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 CSF3RQ99062 836 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 SPOCK3Q9BQ16 436 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 PELOQ9BRX2 385 aaKnown RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 PHF11Q9UIL8 331 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 PPT2Q9UMR5 302 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 TNPO3Q9Y5L0 923 aaKnown RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 NCOA6Q14686 2063 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-202ENST00000381208 LRBAP50851 2863 aa12.06□□□□□ -0.48
RPAIN-202ENST00000381208 A0A1B0GTH9 108 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 C17orf105B2RV13 164 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 HS6ST1O60243 411 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 TPOP07202 933 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 PCNAP12004 261 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 CPN2P22792 545 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 PHBP35232 272 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 RAP1GDS1P52306 607 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 CKAP4Q07065 602 aaKnown RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 ACAP2Q15057 778 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 MPEG1Q2M385 716 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 CMPK2Q5EBM0 449 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 OR4C11Q6IEV9 310 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 ZNF793Q6ZN11 406 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 ZNF572Q7Z3I7 529 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 MDGA2Q7Z553 956 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 UBE3DQ7Z6J8 389 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 CMC1Q7Z7K0 106 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 PACS2Q86VP3 889 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 DND1Q8IYX4 353 aaKnown RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 ZCCHC7Q8N3Z6 543 aaKnown RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 NUBPLQ8TB37 319 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 CA5BP1Q8WTZ4 195 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 TANKQ92844 425 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 RBM18Q96H35 190 aaKnown RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 DGAT2Q96PD7 388 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 OR8D2Q9GZM6 311 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 TSPYL1Q9H0U9 437 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 TP63Q9H3D4 680 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 PSD3Q9NYI0 1048 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 CACNA1CQ13936 2221 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 OR14I1A6ND48 311 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 TMEM200CA6NKL6 621 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 UBXN8O00124 270 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 TGFB1P01137 390 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 GFAPP14136 432 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 CNR1P21554 472 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 PTX3P26022 381 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 PTGER1P34995 402 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 BUD31P41223 144 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 STT3AP46977 705 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 HK2P52789 917 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 ALDH18A1P54886 795 aaKnown RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 RNF4P78317 190 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 IGLV3-21P80748 117 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 HSF1Q00613 529 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 PLIN5Q00G26 463 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 PLGLB1Q02325 96 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 C10orf62Q5T681 223 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-202ENST00000381208 ADNP2Q6IQ32 1131 aa12.05□□□□□ -0.48
RPAIN-202ENST00000381208 IL20RBQ6UXL0 311 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms