RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 OR6C75A6NL08 312 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 CDC7O00311 574 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 STSP08842 583 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 SLC2A2P11168 524 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 PAICSP22234 425 aaKnown RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 CYP2F1P24903 491 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 ZFP36L2P47974 494 aaKnown RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 DAOAP59103 153 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 NCF4Q15080 339 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 SLC14A2Q15849 920 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 SSX1Q16384 188 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 FAM83EQ2M2I3 478 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 TIMM50Q3ZCQ8 353 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 TRIQKQ629K1 86 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 ASPGQ86U10 573 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 FAM217AQ8IXS0 508 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 AKR7LQ8NHP1 331 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 UBA3Q8TBC4 463 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 GGHQ92820 318 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 KIAA1143Q96AT1 154 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF669Q96BR6 464 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 SPATA13Q96N96 652 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 NELL2Q99435 816 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 GPR22Q99680 433 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 MVB12BQ9H7P6 319 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 CHMP1AQ9HD42 196 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 AFF4Q9UHB7 1163 aaKnown RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 BTRCQ9Y297 605 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 USP3Q9Y6I4 520 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 AP1M2Q9Y6Q5 423 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 SCN1AP35498 2009 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 WASH4PA8MWX3 477 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 G3V3Q6 166 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 PGK1P00558 417 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 GP1BAP07359 652 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 SYPP08247 313 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 PVALBP20472 110 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 GPR143P51810 404 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 OPCMLQ14982 345 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 IRF4Q15306 451 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 TAF1AQ15573 450 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF648Q5T619 568 aaPredicted RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 BCL2L15Q5TBC7 163 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 PHYKPLQ8IUZ5 450 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 EFHBQ8N7U6 833 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 TMEM41AQ96HV5 264 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 C14orf144Q96I85 54 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 PKMYT1Q99640 499 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 FBXO44Q9H4M3 255 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 EML4Q9HC35 981 aaKnown RBP7.16□□□□□ -1.26
CDKL5-201ENST00000379989 TAS2R16Q9NYV7 291 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 POMT2Q9UKY4 750 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 DMRT1Q9Y5R6 373 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 TRIP11Q15643 1979 aa7.16□□□□□ -1.26
CDKL5-201ENST00000379989 ZCWPW2A0A1B0GU75 182 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 C7orf66A4D0T2 115 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 GSTA4O15217 222 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 EEDO75530 441 aaKnown RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF8P17098 575 aaPredicted RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CXCR3P49682 368 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CTSCP53634 463 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 ATXN1P54253 815 aaKnown RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 MAZP56270 477 aaKnown RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 BTG1P62324 171 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 RAC1P63000 192 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CAP1Q01518 475 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 SP3Q02447 781 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 RCAN2Q14206 197 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 PPA1Q15181 289 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 USP39Q53GS9 565 aaKnown RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 NOMO2Q5JPE7 1267 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 DGKKQ5KSL6 1271 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 MSANTD2Q6P1R3 559 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 LRRC8DQ7L1W4 858 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 ADGRF3Q8IZF5 1079 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 Q8N402 240 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 FTMTQ8N4E7 242 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 ZNF454Q8N9F8 522 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CAMKVQ8NCB2 501 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 PCDH19Q8TAB3 1148 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 EXOSC4Q9NPD3 245 aaKnown RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 LIMD1Q9UGP4 676 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 ING1Q9UK53 422 aaPredicted RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 FBXW11Q9UKB1 542 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CLEC4AQ9UMR7 237 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 TDRD15B5MCY1 1934 aaKnown RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CLDN4O14493 209 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 PER2O15055 1255 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 AOC2O75106 756 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 PRAMEF1O95521 474 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 EGFP01133 1207 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CYP17A1P05093 508 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 CRYBA1P05813 215 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 ZDHHC11BP0C7U3 371 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 RORAP35398 523 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 SULT1E1P49888 294 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 MTPNP58546 118 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 RPP30P78346 268 aaKnown RBP7.15□□□□□ -1.26
CDKL5-201ENST00000379989 OLIG2Q13516 323 aa7.15□□□□□ -1.26
CDKL5-201ENST00000379989 LRRC32Q14392 662 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms