RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 SLC6A1P30531 599 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 SLC1A3P43003 542 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 SELENOPP49908 381 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 PPA1Q15181 289 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 RNASE12Q5GAN4 147 aaKnown RBP8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF678Q5SXM1 525 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF567Q8N184 647 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 SVBPQ8N300 66 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 PTGR2Q8N8N7 351 aaPredicted RBP8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 UXS1Q8NBZ7 420 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF548Q8NEK5 533 aaPredicted RBP8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 ISG20Q96AZ6 181 aaKnown RBP8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 POLR2J2Q9GZM3 115 aaKnown RBP8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 ARL6Q9H0F7 186 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 PPP1R3EQ9H7J1 279 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 REEP1Q9H902 201 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 ATP13A1Q9HD20 1204 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 PLCXD1Q9NUJ7 323 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 RCOR3Q9P2K3 495 aaPredicted RBP8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 ZNF541Q9H0D2 1346 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 SCN11AQ9UI33 1791 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 SRCAPQ6ZRS2 3230 aa8.15□□□□□ -1.1
NHLRC3-201ENST00000379599 NEDD8-MDP1E9PL57 170 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 M0QYV0 167 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 ADAMDEC1O15204 470 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 LILRB5O75023 590 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 RAD17O75943 681 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 MLYCDO95822 493 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 SPAM1P38567 509 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 MMP12P39900 470 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 AFF1P51825 1210 aaKnown RBP8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 PPP3R1P63098 170 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 GUCA2BQ16661 112 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 FAM171A1Q5VUB5 890 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 CATSPERGQ6ZRH7 1159 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 SPATA19Q7Z5L4 167 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 SLC43A2Q8N370 569 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 TCTEX1D2Q8WW35 142 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 KLRG1Q96E93 195 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 C1GALT1C1Q96EU7 318 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 ZIC5Q96T25 663 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 B3GNT5Q9BYG0 378 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 DPAGT1Q9H3H5 408 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 RIMS4Q9H426 269 aaPredicted RBP8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 SEMA4BQ9NPR2 832 aaPredicted RBP8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 TCEAL9Q9UHQ7 104 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 LHX6Q9UPM6 363 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 OR10H1Q9Y4A9 318 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 SCN7AQ01118 1682 aa8.15□□□□□ -1.11
NHLRC3-201ENST00000379599 C7orf66A4D0T2 115 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 BTBD17A6NE02 478 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 MED7O43513 233 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 SPDEFO95238 335 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 HLA-DQB1P01920 261 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 TFP02787 698 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 VTNP04004 478 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 PRKAR2AP13861 404 aaKnown RBP8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 NFYAP23511 347 aaPredicted RBP8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 CRYBB2P43320 205 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 ASMTP46597 345 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 PPT1P50897 306 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 CASP9P55211 416 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 RBBP4Q09028 425 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 PWP1Q13610 501 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 DOC2BQ14184 412 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 ST3GAL2Q16842 350 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 ZNF628Q5EBL2 1059 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 AADACL4Q5VUY2 407 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 TRNP1Q6NT89 227 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 PLEKHH3Q7Z736 793 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 GPR65Q8IYL9 337 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 C7orf31Q8N865 590 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 OR10K1Q8NGX5 313 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 CENPIQ92674 756 aaPredicted RBP8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 TCEAL4Q96EI5 215 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 FAM120BQ96EK7 910 aaKnown RBP8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 PIWIL1Q96J94 861 aaKnown RBP8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 HRASLS5Q96KN8 279 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 ZDHHC15Q96MV8 337 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 NEU1Q99519 415 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 ZNF670Q9BS34 389 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 SOX7Q9BT81 388 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 UNKLQ9H9P5 680 aaKnown RBP8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 SLC6A20Q9NP91 592 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 ZFP57Q9NU63 452 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 PPP4R1LQ9P1A2 415 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 CFAP97Q9P2B7 532 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 ING1Q9UK53 422 aaPredicted RBP8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 CA14Q9ULX7 337 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 MINPP1Q9UNW1 487 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 CXorf65A6NEN9 183 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 GRXCR2A6NFK2 248 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 H7C0S8 307 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 ARPC5O15511 151 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 CA12O43570 354 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 SEMA7AO75326 666 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 GGT2P36268 569 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 SUOXP51687 545 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 JAK3P52333 1124 aa8.14□□□□□ -1.11
NHLRC3-201ENST00000379599 RAB8AP61006 207 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms