RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 DCTN3O75935 186 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 SEC24DO94855 1032 aaPredicted RBP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ITGAMP11215 1152 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 SOX11P35716 441 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ARL1P40616 181 aaPredicted RBP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 SF3A3Q12874 501 aaKnown RBP eCLIP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ZRSR2Q15696 482 aaKnown RBP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 PDCD2Q16342 344 aaPredicted RBP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 INAQ16352 499 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 SLC9B1Q4ZJI4 515 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 C10orf62Q5T681 223 aaPredicted RBP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 PRAMEF9Q5VWM5 478 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 METTL21CQ5VZV1 264 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 GRHL2Q6ISB3 625 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ZNF425Q6IV72 752 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 RPUSD3Q6P087 351 aaKnown RBP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 SLCO4C1Q6ZQN7 724 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 RIPOR1Q6ZS17 1223 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ACAD11Q709F0 780 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 OR9A4Q8NGU2 314 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ZCCHC10Q8TBK6 192 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ACTRT2Q8TDY3 377 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 SLC5A11Q8WWX8 675 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 MARVELD3Q96A59 401 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 PRAP1Q96NZ9 151 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 OR2A5Q96R48 311 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 EFCAB11Q9BUY7 163 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 SYNPO2LQ9H987 977 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 HCN3Q9P1Z3 774 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 FIS1Q9Y3D6 152 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 TIMM22Q9Y584 194 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 HEATR5BQ9P2D3 2071 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ITPR2Q14571 2701 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 SERTM1A2A2V5 107 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 PCDH17O14917 1159 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ABCB7O75027 752 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 SKAP2O75563 359 aaPredicted RBP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 WDPCPO95876 746 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 KRT6AP02538 564 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 KRT6BP04259 564 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 JUNP05412 331 aaKnown RBP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 SERPINB3P29508 390 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 KRT6CP48668 564 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 PCOLCEQ15113 449 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 XKR6Q5GH73 641 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 CRYBG3Q68DQ2 2970 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 C17orf64Q86WR6 236 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 NR4A3Q92570 626 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 NEIL2Q969S2 332 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 PTCD3Q96EY7 689 aaKnown RBP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 TUBB6Q9BUF5 446 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ZNF700Q9H0M5 742 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 PELI2Q9HAT8 420 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 TCF7L2Q9NQB0 619 aa12.93□□□□□ -0.34
PRPF18-202ENST00000378572 C19orf25Q9UFG5 118 aaPredicted RBP12.93□□□□□ -0.34
PRPF18-202ENST00000378572 ZGRF1Q86YA3 2104 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 POLEQ07864 2286 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 IGHV3-20A0A0C4DH32 117 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 H0YIV9 168 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 EBAG9O00559 213 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 PIP5K1BO14986 540 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 HNRNPRO43390 633 aaKnown RBP12.92□□□□□ -0.34
PRPF18-202ENST00000378572 FOXS1O43638 330 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 UNC5CO95185 931 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 RASAL1O95294 804 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 CRYABP02511 175 aaKnown RBP12.92□□□□□ -0.34
PRPF18-202ENST00000378572 C1GALT1C1LP0DN25 315 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 ICAM2P13598 275 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 SRSF11Q05519 484 aaKnown RBP12.92□□□□□ -0.34
PRPF18-202ENST00000378572 LAPTM5Q13571 262 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 DOC2AQ14183 400 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 BTBD16Q32M84 506 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 XKR7Q5GH72 579 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 PAGE2BQ5JRK9 111 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 NXPE4Q6UWF7 544 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 C6orf89Q6UWU4 347 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 TMPRSS11BQ86T26 416 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 SLC34A3Q8N130 599 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 ABHD11Q8NFV4 315 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 CEP70Q8NHQ1 597 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 PSMF1Q92530 271 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 RILPQ96NA2 401 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 TAAR6Q96RI8 345 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 TGIF2Q9GZN2 237 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 PITHD1Q9GZP4 211 aaPredicted RBP12.92□□□□□ -0.34
PRPF18-202ENST00000378572 TUBB1Q9H4B7 451 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 HEY2Q9UBP5 337 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 SEC14L3Q9UDX4 400 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 SNX6Q9UNH7 406 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 TSC22D4Q9Y3Q8 395 aa12.92□□□□□ -0.34
PRPF18-202ENST00000378572 CELSR2Q9HCU4 2923 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 OR5H15A6NDH6 313 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 CCDC22O60826 627 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 ULK1O75385 1050 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 STSP08842 583 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 IL1RNP18510 177 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 CD22P20273 847 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 RPS15AP62244 130 aaKnown RBP12.91□□□□□ -0.34
PRPF18-202ENST00000378572 RBPJQ06330 500 aa12.91□□□□□ -0.34
PRPF18-202ENST00000378572 LANCL3Q6ZV70 420 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms