RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 NKAPLQ5M9Q1 402 aa9.47□□□□□ -0.89
SPEN-201ENST00000375759 GTF2IRD2BQ6EKJ0 949 aa9.47□□□□□ -0.89
SPEN-201ENST00000375759 GTF2IRD2Q86UP8 949 aa9.47□□□□□ -0.89
SPEN-201ENST00000375759 GDPD1Q8N9F7 314 aa9.47□□□□□ -0.89
SPEN-201ENST00000375759 OR9A1PQ8NGU1 263 aa9.47□□□□□ -0.89
SPEN-201ENST00000375759 PEX13Q92968 403 aa9.47□□□□□ -0.89
SPEN-201ENST00000375759 MGLLQ99685 303 aa9.47□□□□□ -0.89
SPEN-201ENST00000375759 DPCDQ9BVM2 203 aaPredicted RBP9.47□□□□□ -0.89
SPEN-201ENST00000375759 FER1L6Q2WGJ9 1857 aa9.47□□□□□ -0.89
SPEN-201ENST00000375759 OXSR1O95747 527 aaPredicted RBP9.46□□□□□ -0.89
SPEN-201ENST00000375759 PXKQ7Z7A4 578 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 ACBD4Q8NC06 268 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 GIMAP5Q96F15 307 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 TSGA13Q96PP4 275 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 FAM118AQ9NWS6 357 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 ERVK13-1Q9NX77 482 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 TMPRSS11EQ9UL52 423 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 A0A0G2JMP0 313 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 ACP5P13686 325 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 PFKLP17858 780 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 ENDOUP21128 410 aaKnown RBP9.46□□□□□ -0.89
SPEN-201ENST00000375759 SEC13P55735 322 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 SERINC3Q13530 473 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 P4HA3Q7Z4N8 544 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 COMMD7Q86VX2 200 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 OR7G2Q8NG99 324 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 OR4M2Q8NGB6 313 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 OR8J1Q8NGP2 316 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 KCNA7Q96RP8 456 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 TRIB3Q96RU7 358 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 GPN2Q9H9Y4 310 aaPredicted RBP9.46□□□□□ -0.89
SPEN-201ENST00000375759 CARS2Q9HA77 564 aaKnown RBP9.46□□□□□ -0.89
SPEN-201ENST00000375759 SCML2Q9UQR0 700 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 ZNF487B1APH4 448 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 SOWAHAQ2M3V2 549 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 SLC35F1Q5T1Q4 408 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 ATAD3CQ5T2N8 411 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 TRBV2A0A0J9YWF9 115 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 FAM163BP0C2L3 166 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 ACTR1BP42025 376 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 NTRK2Q16620 822 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 SAV1Q9H4B6 383 aaPredicted RBP9.46□□□□□ -0.89
SPEN-201ENST00000375759 LIPT1Q9Y234 373 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 DLGAP4Q9Y2H0 992 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 BHMG1C9JSJ3 638 aaPredicted RBP9.46□□□□□ -0.89
SPEN-201ENST00000375759 THEGLP0DJG4 465 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 ZNF8P17098 575 aaPredicted RBP9.46□□□□□ -0.89
SPEN-201ENST00000375759 NRLP54845 237 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 FLYWCH1Q4VC44 716 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 PLEKHS1Q5SXH7 462 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 SLC6A16Q9GZN6 736 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 SLC7A11Q9UPY5 501 aa9.46□□□□□ -0.89
SPEN-201ENST00000375759 DNAJB6O75190 326 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 IFNGR1P15260 489 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 MOGSQ13724 837 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 ZNF529Q6P280 563 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 AGTRAPQ6RW13 159 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 TICAM1Q8IUC6 712 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 FTMTQ8N4E7 242 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 TBC1D15Q8TC07 691 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 C7orf43Q8WVR3 580 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 SECISBP2Q96T21 854 aaKnown RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 POLDIP3Q9BY77 421 aaKnown RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 NSUN3Q9H649 340 aaKnown RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 EPHA6Q9UF33 1036 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 ZFR2Q9UPR6 939 aaKnown RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 HMX3A6NHT5 357 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 FGF3P11487 239 aaPredicted RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 OR1E2P47887 323 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 PCBP2Q15366 365 aaKnown RBP eCLIP9.46□□□□□ -0.92e-7■■■■■ 42.3
SPEN-201ENST00000375759 ITPRIPL2Q3MIP1 535 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 KCNJ9Q92806 393 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 PPIL3Q9H2H8 161 aaKnown RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 NFS1Q9Y697 457 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 ZNF701M0R085 212 aaPredicted RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 HK3P52790 923 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 MYLK3Q32MK0 819 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 MINDY1Q8N5J2 469 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 ARL11Q969Q4 196 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 ZNF701Q9NV72 531 aaPredicted RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 SLC22A31A6NKX4 558 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 STT3AP46977 705 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 RPS24P62847 133 aaKnown RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 BCL2A1Q16548 175 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 SYPL2Q5VXT5 272 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 SLC39A4Q6P5W5 647 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 TMEM234Q8WY98 164 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 VRK1Q99986 396 aaPredicted RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 PTGES2Q9H7Z7 377 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 ZNF395Q9H8N7 513 aaPredicted RBP9.46□□□□□ -0.9
SPEN-201ENST00000375759 OR2S2Q9NQN1 319 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 BIN3Q9NQY0 253 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 SLC1A7O00341 560 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 ALPIP09923 528 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 MAGEA3P43357 314 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 LAPTM4AQ15012 233 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 SLC36A3Q495N2 470 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 NOXRED1Q6NXP6 359 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 HACD2Q6Y1H2 254 aa9.46□□□□□ -0.9
SPEN-201ENST00000375759 PRSS48Q7RTY5 328 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms