RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 MYO1GB0I1T2 1018 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 H7BY64 318 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 PLK4O00444 970 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 ANGPTL1O95841 491 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 AK1P00568 194 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 ADAP00813 363 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 TNFP01375 233 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 FHP07954 510 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 TFPTP0C1Z6 253 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 BMP1P13497 986 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CSNK2A2P19784 350 aaPredicted RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 EFNA1P20827 205 aaPredicted RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 IGFALSP35858 605 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 XCR1P46094 333 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CCT3P49368 545 aaKnown RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CDC42P60953 191 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CDK5R2Q13319 367 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 SF1Q15637 639 aaKnown RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 NKG7Q16617 165 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 TMEM44Q2T9K0 475 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 SPDYE7PQ495Y7 208 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 TOR1AIP1Q5JTV8 583 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 FAM109BQ6ICB4 259 aaPredicted RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 ABHD17CQ6PCB6 329 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 TBPL2Q6SJ96 375 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 ANGPTL8Q6UXH0 198 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CD300LDQ6UXZ3 194 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CEACAM20Q6UY09 585 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 KCTD8Q6ZWB6 473 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 ABHD13Q7L211 337 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 PRSS48Q7RTY5 328 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 C6orf120Q7Z4R8 191 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 P3H2Q8IVL5 708 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CARFQ8N187 725 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 ANKRD53Q8N9V6 530 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CHDHQ8NE62 594 aaPredicted RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 OR52E1Q8NGJ3 308 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CDC26Q8NHZ8 85 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 SPPL2AQ8TCT8 520 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 ADAMTS18Q8TE60 1221 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 PHF10Q8WUB8 498 aaKnown RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 PPP1R14BQ96C90 147 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CRELD1Q96HD1 420 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 PRAP1Q96NZ9 151 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 SERINC2Q96SA4 455 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 MBOAT4Q96T53 435 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 GSDMCQ9BYG8 508 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 PRRG3Q9BZD7 231 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 TRIM8Q9BZR9 551 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 MKRN2Q9H000 416 aaKnown RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 ADNPQ9H2P0 1102 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 OSGEPL1Q9H4B0 414 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 UCK1Q9HA47 277 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 LYRM4Q9HD34 91 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 NECTIN3Q9NQS3 549 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 IMP3Q9NV31 184 aaKnown RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 CNOT2Q9NZN8 540 aaKnown RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 NDUFAF4Q9P032 175 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 PDP1Q9P0J1 537 aaPredicted RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 MRPS17Q9Y2R5 130 aaKnown RBP8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 GPSM3Q9Y4H4 160 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 OR1A2Q9Y585 309 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 PCDHGA8Q9Y5G5 932 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 ZNF780BQ9Y6R6 833 aa8.28□□□□□ -1.08
SNRNP40-202ENST00000373720 COL4A3Q01955 1670 aa8.27□□□□□ -1.08
SNRNP40-202ENST00000373720 M0R3G1 203 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC1A7O00341 560 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 PLOD2O00469 737 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 FAAHO00519 579 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC22A1O15245 554 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 EMC8O43402 210 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SH3BP5O60239 455 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 CCNB2O95067 398 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 GADD45GO95257 159 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 RASGRP1O95267 797 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 KLF8O95600 359 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 CHRM5P08912 532 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 GNAO1P09471 354 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 CCNA2P20248 432 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 GSTM3P21266 225 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 ATP5A1P25705 553 aaKnown RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 LIMS1P48059 325 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SERPINB10P48595 397 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 ST13P50502 369 aaKnown RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 VLDLRP98155 873 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 GAB1Q13480 694 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 FGL2Q14314 439 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 LRRC32Q14392 662 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 TCEA2Q15560 299 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 MLF2Q15773 248 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC25A30Q5SVS4 291 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 ATAD3BQ5T9A4 648 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 NDUFAF5Q5TEU4 345 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 RNLSQ5VYX0 342 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 SLC48A1Q6P1K1 146 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 LIAT1Q6ZQX7 453 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 ZNF551Q7Z340 670 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 ABI3BPQ7Z7G0 1075 aa8.27□□□□□ -1.09
SNRNP40-202ENST00000373720 IQCHQ86VS3 1027 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms