RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 BMPR2Q13873 1038 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 SF3B4Q15427 424 aaKnown RBP eCLIP13.73□□□□□ -0.212e-9■■■■□ 23.1
CDKN1A-202ENST00000373711 UBAP2Q5T6F2 1119 aaKnown RBP13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 CASC4Q6P4E1 433 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 OPN5Q6U736 354 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 PRIMA1Q86XR5 153 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 LMNTD2Q8IXW0 634 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 MYO1HQ8N1T3 1032 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 LIX1Q8N485 282 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 CALML6Q8TD86 181 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.73□□□□□ -0.211e-7■□□□□ 11
CDKN1A-202ENST00000373711 DAZLQ92904 295 aaKnown RBP13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 FAR2Q96K12 515 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 PRTFDC1Q9NRG1 225 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 ZNF629Q9UEG4 869 aaPredicted RBP13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 TRMT6Q9UJA5 497 aaKnown RBP13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 ZNF223Q9UK11 482 aaPredicted RBP13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 PDE10AQ9Y233 779 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 MAD1L1Q9Y6D9 718 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 CLCA3PQ9Y6N3 262 aa13.73□□□□□ -0.21
CDKN1A-202ENST00000373711 A0A0G2JMM0 328 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 A0A1W2PPB8 328 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 A0A1W2PRS3 328 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 CLCA1A8K7I4 914 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 KIR3DP1A8MWS1 328 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 KIAA1324LA8MWY0 1029 aaPredicted RBP13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 G3V3Y1 287 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 DNAJB6O75190 326 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 B3GALT4O96024 378 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 IL2RAP01589 272 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 SCTRP47872 440 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 GPR143P51810 404 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 RAB8AP61006 207 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 SLC13A2Q13183 592 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 CTBP1Q13363 440 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 CSHL1Q14406 222 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 ELAVL1Q15717 326 aaKnown RBP13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 P3H2Q8IVL5 708 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 SCUBE1Q8IWY4 988 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 ZBED8Q8IZ13 594 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 CA13Q8N1Q1 262 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 RELL2Q8NC24 303 aaPredicted RBP13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 OR5L2Q8NGL0 311 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 ATL1Q8WXF7 558 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 COX4I2Q96KJ9 171 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 AIF1LQ9BQI0 150 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 NPLQ9BXD5 320 aaPredicted RBP13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 TRIM54Q9BYV2 358 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 PLEKHF2Q9H8W4 249 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 FBXO6Q9NRD1 293 aaPredicted RBP13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 BOKQ9UMX3 212 aaPredicted RBP13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 CHMP2BQ9UQN3 213 aa13.72□□□□□ -0.21
CDKN1A-202ENST00000373711 ARID1AO14497 2285 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 COL6A5A8TX70 2615 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 CCDC151A5D8V7 595 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 WWP2O00308 870 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 LY6G6DO95868 133 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 FREM3P0C091 2139 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 H2AFXP16104 143 aaPredicted RBP13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 PCSK6P29122 969 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 HNF4AP41235 474 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 AP1S2P56377 157 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 STXBP1P61764 594 aaKnown RBP13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 RCN2Q14257 317 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 ZNF750Q32MQ0 723 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 CATSPEREQ5SY80 951 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 RELL1Q8IUW5 271 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 LACC1Q8IV20 430 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 ULK2Q8IYT8 1036 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 MORN4Q8NDC4 146 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 FBXO36Q8NEA4 188 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 OR8K3Q8NH51 312 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 OR14A16Q8NHC5 309 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 SLC5A11Q8WWX8 675 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 CAVIN3Q969G5 261 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 HSPBAP1Q96EW2 488 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 SCYL1Q96KG9 808 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 BDH2Q9BUT1 245 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 PHACTR1Q9C0D0 580 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 TSPYL1Q9H0U9 437 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 CDC42EP4Q9H3Q1 356 aaKnown RBP13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 PLAC1Q9HBJ0 212 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 QPCTLQ9NXS2 382 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 ARL15Q9NXU5 204 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 NINJ2Q9NZG7 142 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 MED16Q9Y2X0 877 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 DYRK1BQ9Y463 629 aa13.71□□□□□ -0.21
CDKN1A-202ENST00000373711 MAGEB16A2A368 324 aa13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 AHRRA9YTQ3 701 aa13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 PRKNO60260 465 aaPredicted RBP13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 IFNA16P05015 189 aa13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 SERPINA6P08185 405 aa13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 CD53P19397 219 aa13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 HPDP32754 393 aaPredicted RBP13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 TIMP3P35625 211 aa13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 DNASE1L1P49184 302 aa13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 HK2P52789 917 aa13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 RAB38P57729 211 aa13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 GPX6P59796 221 aa13.7□□□□□ -0.22
CDKN1A-202ENST00000373711 REEP5Q00765 189 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms