RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 SIRT3Q9NTG7 399 aaPredicted RBP22.65■■□□□ 1.22
CDK9-201ENST00000373264 KCNK6Q9Y257 313 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 ANGPT4Q9Y264 503 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 MYO10Q9HD67 2058 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 IGKV1-8A0A0C4DH67 115 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 CLDN25C9JDP6 229 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 KRT75O95678 551 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 ALPPL2P10696 532 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 CD72P21854 359 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 PTGES3Q15185 160 aaKnown RBP22.65■■□□□ 1.22
CDK9-201ENST00000373264 UAP1L1Q3KQV9 507 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 WDR53Q7Z5U6 358 aaPredicted RBP22.65■■□□□ 1.22
CDK9-201ENST00000373264 OR4D11Q8NGI4 311 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 VANGL1Q8TAA9 524 aaPredicted RBP22.65■■□□□ 1.22
CDK9-201ENST00000373264 MTERF3Q96E29 417 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 NECTIN3Q9NQS3 549 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 POFUT2Q9Y2G5 429 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 ENPP4Q9Y6X5 453 aa22.65■■□□□ 1.22
CDK9-201ENST00000373264 ERGP11308 486 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 ANXA8P13928 327 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 FCARP24071 287 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 RPL3P39023 403 aaKnown RBP22.64■■□□□ 1.21
CDK9-201ENST00000373264 FEN1P39748 380 aaKnown RBP22.64■■□□□ 1.21
CDK9-201ENST00000373264 UBE3AQ05086 875 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 C10orf62Q5T681 223 aaPredicted RBP22.64■■□□□ 1.21
CDK9-201ENST00000373264 AGBL4Q5VU57 503 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 KLHL17Q6TDP4 642 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 OR5D16Q8NGK9 328 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 PHF10Q8WUB8 498 aaKnown RBP22.64■■□□□ 1.21
CDK9-201ENST00000373264 IPCEF1Q8WWN9 437 aaPredicted RBP22.64■■□□□ 1.21
CDK9-201ENST00000373264 NMNAT1Q9HAN9 279 aaPredicted RBP22.64■■□□□ 1.21
CDK9-201ENST00000373264 PRAMEF27A3QJZ7 478 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 PTHP01270 115 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 GADD45AP24522 165 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 GJA4P35212 333 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 SOX9P48436 509 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 TP53BP2Q13625 1128 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 EIF4HQ15056 248 aaKnown RBP22.64■■□□□ 1.21
CDK9-201ENST00000373264 SEC23BQ15437 767 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 UBE2UQ5VVX9 321 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 SAXO2Q658L1 398 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 REEP3Q6NUK4 255 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 VITQ6UXI7 678 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 IKBIPQ70UQ0 350 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 ZNF554Q86TJ5 538 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 ADCK1Q86TW2 530 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 ARMC8Q8IUR7 673 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 LACC1Q8IV20 430 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 JPH3Q8WXH2 748 aaPredicted RBP22.64■■□□□ 1.21
CDK9-201ENST00000373264 PDXPQ96GD0 296 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 TEFMQ96QE5 360 aaKnown RBP22.64■■□□□ 1.21
CDK9-201ENST00000373264 ALPK1Q96QP1 1244 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 INSM2Q96T92 566 aaPredicted RBP22.64■■□□□ 1.21
CDK9-201ENST00000373264 AIF1LQ9BQI0 150 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 RHBGQ9H310 441 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 KLHL31Q9H511 634 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 MS4A12Q9NXJ0 267 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 PRKAG2Q9UGJ0 569 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 ICKQ9UPZ9 632 aa22.64■■□□□ 1.21
CDK9-201ENST00000373264 CLCA1A8K7I4 914 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 EFCAB9A8MZ26 197 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 C4orf51C9J302 202 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 C1QTNF3-AMACRE9PGA6 284 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 PDPK1O15530 556 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 SOX14O95416 240 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 C2orf27AQ580R0 203 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 C6orf120Q7Z4R8 191 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 MFSD4AQ8N468 514 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 CHPT1Q8WUD6 406 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 APOBEC4Q8WW27 367 aaKnown RBP22.63■■□□□ 1.21
CDK9-201ENST00000373264 FERD3LQ96RJ6 166 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 C17orf62Q9BQA9 187 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 ITPAQ9BY32 194 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 HDAC8Q9BY41 377 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 SLIRPQ9GZT3 109 aaKnown RBP22.63■■□□□ 1.21
CDK9-201ENST00000373264 IMP3Q9NV31 184 aaKnown RBP22.63■■□□□ 1.21
CDK9-201ENST00000373264 FAM32AQ9Y421 112 aaKnown RBP22.63■■□□□ 1.21
CDK9-201ENST00000373264 DENND4AQ7Z401 1863 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 A0A1W2PP55 124 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 OR52A4PA6NMU1 304 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 C5orf67F2Z3F1 127 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 SH3BP5O60239 455 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 ZNF12P17014 697 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 CBLP22681 906 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 CTSKP43235 329 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 CCR8P51685 355 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 ZNF750Q32MQ0 723 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 TP53I13Q8NBR0 393 aaPredicted RBP22.63■■□□□ 1.21
CDK9-201ENST00000373264 RNF217Q8TC41 542 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 ARMC5Q96C12 935 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 C12orf66Q96MD2 445 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 ROGDIQ9GZN7 287 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 SLC6A17Q9H1V8 727 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 DUSP12Q9UNI6 340 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 HCN4Q9Y3Q4 1203 aa22.63■■□□□ 1.21
CDK9-201ENST00000373264 A0A1W2PS29 197 aa22.62■■□□□ 1.21
CDK9-201ENST00000373264 HMGN4O00479 90 aa22.62■■□□□ 1.21
CDK9-201ENST00000373264 CAPN5O15484 640 aaPredicted RBP22.62■■□□□ 1.21
CDK9-201ENST00000373264 CCNB2O95067 398 aa22.62■■□□□ 1.21
CDK9-201ENST00000373264 KAT7O95251 611 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms